RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 COL12A1Q99715 3063 aa17.15■□□□□ 0.34
SHKBP1-203ENST00000594298 GOLGA6L10A0A0M3HER8 536 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 GLYATL1P3A0A0U1RQE8 302 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 CDC14CA4D256 554 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 TIAF1O95411 115 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 TCP1P17987 556 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 NR1D1P20393 614 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 LAMB3Q13751 1172 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 ITGA9Q13797 1035 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 DENND5AQ6IQ26 1287 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 KLHL35Q6PF15 583 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 ASB18Q6ZVZ8 466 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 TMEM135Q86UB9 458 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 AMZ2Q86W34 360 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 KMT5CQ86Y97 462 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 GDAP1Q8TB36 358 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 ACTRT1Q8TDG2 376 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 CT55Q8WUE5 264 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 RNF31Q96EP0 1072 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 TTC25Q96NG3 672 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 GPR87Q9BY21 358 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 ZCCHC2Q9C0B9 1178 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 TWSG1Q9GZX9 223 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 RAB6BQ9NRW1 208 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 TLK1Q9UKI8 766 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 RARRES3Q9UL19 164 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 PYCARDQ9ULZ3 195 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 MAN2B2Q9Y2E5 1009 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 DNMT3AQ9Y6K1 912 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 NAV2Q8IVL1 2488 aa17.14■□□□□ 0.33
SHKBP1-203ENST00000594298 IGHV5-51A0A0C4DH38 117 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 PIPSLA2A3N6 862 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 USP27XA6NNY8 438 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 FOLR1P15328 257 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 HADHAP40939 763 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 PPP1CAP62136 330 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 ACY1Q03154 408 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 CDH17Q12864 832 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 TUBB3Q13509 450 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 OLIG2Q13516 323 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 SEMA5AQ13591 1074 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 RPE65Q16518 533 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 PWWP2BQ6NUJ5 590 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 PPP1R21Q6ZMI0 780 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 ATCAYQ86WG3 371 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 TAB3Q8N5C8 712 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 PRELID2Q8N945 189 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 RASGEF1AQ8N9B8 481 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 DNAAF3Q8N9W5 541 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 SIDT2Q8NBJ9 832 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 DDHD1Q8NEL9 900 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 GPR150Q8NGU9 434 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 MAGOHBQ96A72 148 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 CD180Q99467 661 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 ARL5AQ9Y689 179 aa17.13■□□□□ 0.33
SHKBP1-203ENST00000594298 AP3B1O00203 1094 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 BUD23O43709 281 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 POP7O75817 140 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 SUN1O94901 812 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 ETS1P14921 441 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 RPL22P35268 128 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 KCNJ1P48048 391 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 LDLRAP1Q5SW96 308 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 OR4K2Q8NGD2 314 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 THAP4Q8WY91 577 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 MS4A14Q96JA4 679 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 PSMG3-AS1Q96PY0 264 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 ACTL8Q9H568 366 aa17.12■□□□□ 0.33
SHKBP1-203ENST00000594298 CTSCP53634 463 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 MSLNQ13421 630 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 KCNAB1Q14722 419 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 CHRNA6Q15825 494 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 UGT8Q16880 541 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 FAM151BQ6UXP7 276 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 FAM83HQ6ZRV2 1179 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 D2HGDHQ8N465 521 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 ZNF398Q8TD17 642 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 COG1Q8WTW3 980 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 ZFPM2Q8WW38 1151 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 ZNF514Q96K75 400 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 NAPGQ99747 312 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 MAP3K3Q99759 626 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 AP1M1Q9BXS5 423 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 EIF2B3Q9NR50 452 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 FGF21Q9NSA1 209 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 SMOXQ9NWM0 555 aa17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 ZNF106Q9H2Y7 1883 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-203ENST00000594298 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 OR5K3A6NET4 321 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 TLCD2A6NGC4 264 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 GAPDHSO14556 408 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 UGT1A9O60656 530 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 PDGFAP04085 211 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 APRTP07741 180 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 EBLN1P0CF75 366 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 ZSCAN5DPP0CG00 497 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 MTHFD1P11586 935 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 TPH1P17752 444 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 UGT1A6P19224 532 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 UGT1A1P22309 533 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms