RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PCDHGB6Q9Y5F9 930 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 MROH5Q6ZUA9 1318 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 FAM221BA6H8Z2 402 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ISM1B1AKI9 464 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 FSCN2O14926 492 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 PI15O43692 258 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 CDRT1O95170 752 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 POU3F3P20264 500 aaPredicted RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 STXBP5Q5T5C0 1151 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 TMEM65Q6PI78 240 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ALKAL2Q6UX46 152 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 PID1Q7Z2X4 250 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ATCAYQ86WG3 371 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 LYSMD2Q8IV50 215 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 CARFQ8N187 725 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 IGDCC4Q8TDY8 1250 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 UFD1Q92890 307 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF669Q96BR6 464 aaPredicted RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ACBD6Q9BR61 282 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 NIFKQ9BYG3 293 aaKnown RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 NYAP2Q9P242 653 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 CDH7Q9ULB5 785 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 UBDO15205 165 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 RGS10O43665 173 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ZBTB14O43829 449 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 POP7O75817 140 aaKnown RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 PCCAP05165 728 aaPredicted RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC2A2P11168 524 aaPredicted RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ALAS1P13196 640 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF155Q12901 538 aaPredicted RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 LAPTM5Q13571 262 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ZACNQ401N2 412 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 FTMTQ8N4E7 242 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 OR5T2Q8NGG2 359 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 PPP1R13LQ8WUF5 828 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 RIPOR3Q96MK2 946 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 MED18Q9BUE0 208 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 PRDM8Q9NQV8 689 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 NLKQ9UBE8 527 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SARDHQ9UL12 918 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 RGS13O14921 159 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SCO2O43819 266 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 PTP4A3O75365 173 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ARHGAP40Q5TG30 622 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ATF7IP2Q5U623 682 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 CHSY3Q70JA7 882 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 NLRC3Q7RTR2 1065 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SPAG4Q9NPE6 437 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 PRDM9Q9NQV7 894 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 OR14I1A6ND48 311 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 PSAPP07602 524 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 UMPSP11172 480 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 NDUFB7P17568 137 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ALDH3A2P51648 485 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 PSPHP78330 225 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 TLE2Q04725 743 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 NT5DC1Q5TFE4 455 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF705AQ6ZN79 300 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 CCDC107Q8WV48 283 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 CANT1Q8WVQ1 401 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ZBTB20Q9HC78 741 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 COMMD3Q9UBI1 195 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 KCNIP3Q9Y2W7 256 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 A0A1W2PPL8 197 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 SERPINE1P05121 402 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ZBTB48P10074 688 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 TBXAS1P24557 533 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ASMTP46597 345 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 KCNJ10P78508 379 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 PLEKHG4Q58EX7 1191 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 PXKQ7Z7A4 578 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF280BQ86YH2 543 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 PHTF2Q8N3S3 785 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 OR7G3Q8NG95 312 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 MUS81Q96NY9 551 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 NOD1Q9Y239 953 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 LOC100509620A0A075B734 347 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 WDR27A2RRH5 827 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 LRIT2A6NDA9 550 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 PRAMEF2O60811 474 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 EIF2S3P41091 472 aaKnown RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 HOXA1P49639 335 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 DDX39BQ13838 428 aaKnown RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 GRK1Q15835 563 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 TATDN1Q6P1N9 297 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF790Q6PG37 636 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ANKS3Q6ZW76 656 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 OR2T34Q8NGX1 318 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ADIPOR1Q96A54 375 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 S100A13Q99584 98 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 STUB1Q9UNE7 303 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 hCG_1807616A0A1W2PRN6 198 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 CACNB4O00305 520 aaPredicted RBP8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 SUPT20HL2P0C7V6 817 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 C19orf57Q0VDD7 668 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 VASNQ6EMK4 673 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 ACAD10Q6JQN1 1059 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC26A11Q86WA9 606 aa8.87□□□□□ -0.99
GTF2A1-203ENST00000553612 TRAPPC5Q8IUR0 188 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms