RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 CTSCP53634 463 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 NFKBIBQ15653 356 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 CYP2A13Q16696 494 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 ODF2Q5BJF6 829 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 Q6ZS92 163 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 B4GALNT4Q76KP1 1039 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 ACVR1CQ8NER5 493 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 OR2L2Q8NH16 312 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 TADA1Q96BN2 335 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 BARD1Q99728 777 aaKnown RBP16.43■□□□□ 0.22
VPS29-204ENST00000548259 GLOD4Q9HC38 313 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 ATP13A2Q9NQ11 1180 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 PTRH2Q9Y3E5 179 aaKnown RBP16.43■□□□□ 0.22
VPS29-204ENST00000548259 PCDHGA10Q9Y5H3 936 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 SPO11Q9Y5K1 396 aa16.43■□□□□ 0.22
VPS29-204ENST00000548259 ZNF487B1APH4 448 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 APOL1O14791 398 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 AURKAO14965 403 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 ZNF749O43361 778 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 UGT1A9O60656 530 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 PROSCO94903 275 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 MT-CYBP00156 380 aaPredicted RBP16.42■□□□□ 0.22
VPS29-204ENST00000548259 EPOP01588 193 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 RALBP11234 206 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 UGT1A6P19224 532 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 UGT1A1P22309 533 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 UGT1A4P22310 534 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 PRDX3P30048 256 aaKnown RBP16.42■□□□□ 0.22
VPS29-204ENST00000548259 LLGL1Q15334 1064 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 ZRSR2Q15696 482 aaKnown RBP16.42■□□□□ 0.22
VPS29-204ENST00000548259 DUS1LQ6P1R4 473 aaKnown RBP16.42■□□□□ 0.22
VPS29-204ENST00000548259 ZNF449Q6P9G9 518 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 FBXO38Q6PIJ6 1188 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 GLT6D1Q7Z4J2 308 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 SPATA22Q8NHS9 363 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 WDR77Q9BQA1 342 aaPredicted RBP16.42■□□□□ 0.22
VPS29-204ENST00000548259 ZNF552Q9H707 407 aaPredicted RBP16.42■□□□□ 0.22
VPS29-204ENST00000548259 UGT1A7Q9HAW7 530 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 UGT1A10Q9HAW8 530 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 UGT1A8Q9HAW9 530 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 SMOXQ9NWM0 555 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 P4HTMQ9NXG6 502 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 CTTNBP2NLQ9P2B4 639 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 IFT80Q9P2H3 777 aaPredicted RBP16.42■□□□□ 0.22
VPS29-204ENST00000548259 FAM153AQ9UHL3 310 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 OSGIN2Q9Y236 505 aa16.42■□□□□ 0.22
VPS29-204ENST00000548259 A0A1B0GUH1 482 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 LRRD1A4D1F6 860 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 IFRD1O00458 451 aaPredicted RBP16.41■□□□□ 0.22
VPS29-204ENST00000548259 DDX3YO15523 660 aaKnown RBP16.41■□□□□ 0.22
VPS29-204ENST00000548259 SERPING1P05155 500 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 POU3F2P20265 443 aaPredicted RBP16.41■□□□□ 0.22
VPS29-204ENST00000548259 KDELR1P24390 212 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 ITGA3P26006 1051 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 SOX8P57073 446 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 DCDP81605 110 aaKnown RBP16.41■□□□□ 0.22
VPS29-204ENST00000548259 TEX44Q53QW1 395 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 ZNF789Q5FWF6 425 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 SP5Q6BEB4 398 aaPredicted RBP16.41■□□□□ 0.22
VPS29-204ENST00000548259 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
VPS29-204ENST00000548259 BZW1Q7L1Q6 419 aaKnown RBP16.41■□□□□ 0.22
VPS29-204ENST00000548259 DET1Q7L5Y6 550 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 PROKR1Q8TCW9 393 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 SYN2Q92777 582 aaPredicted RBP16.41■□□□□ 0.22
VPS29-204ENST00000548259 PTERQ96BW5 349 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 DCUN1D1Q96GG9 259 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 PPM1MQ96MI6 270 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 AP1M1Q9BXS5 423 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 HSD3B7Q9H2F3 369 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 TXLNGQ9NUQ3 528 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 IL17CQ9P0M4 197 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 UVRAGQ9P2Y5 699 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 FAM8A1Q9UBU6 413 aa16.41■□□□□ 0.22
VPS29-204ENST00000548259 SMTNL1A8MU46 457 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 C2orf74A8MZ97 194 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 PRSS44E7EML9 344 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 KLF7O75840 302 aaPredicted RBP16.4■□□□□ 0.22
VPS29-204ENST00000548259 POLBP06746 335 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 EDN3P14138 238 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 ST6GAL1P15907 406 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 LMAN1P49257 510 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 AIMP2Q13155 320 aaKnown RBP16.4■□□□□ 0.22
VPS29-204ENST00000548259 FIGNQ5HY92 759 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 CRB2Q5IJ48 1285 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 CUZD1Q86UP6 607 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 KCNMB4Q86W47 210 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 VSIG1Q86XK7 387 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 MCEMP1Q8IX19 187 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 CFAP206Q8IYR0 622 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 PLD5Q8N7P1 536 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 SPDYE1Q8NFV5 336 aaPredicted RBP16.4■□□□□ 0.22
VPS29-204ENST00000548259 OR2Y1Q8NGV0 311 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 ZNF398Q8TD17 642 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 BLOC1S5Q8TDH9 187 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 PPP4R1Q8TF05 950 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.4■□□□□ 0.22
VPS29-204ENST00000548259 NACC2Q96BF6 587 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 VPS50Q96JG6 964 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 GBP5Q96PP8 586 aa16.4■□□□□ 0.22
VPS29-204ENST00000548259 ANP32EQ9BTT0 268 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms