RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 COLEC10Q9Y6Z7 277 aa11.18□□□□□ -0.62
RAB5C-203ENST00000546881 SPENQ96T58 3664 aaKnown RBP11.17□□□□□ -0.62
RAB5C-203ENST00000546881 SLC9B1P1A6NJY1 282 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 A6NL46 340 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 C2orf81A6NN90 581 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 GAPDHSO14556 408 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-203ENST00000546881 LCA5LO95447 670 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 LCN10Q6JVE6 187 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 DAAM2Q86T65 1068 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 LILRA3Q8N6C8 439 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-203ENST00000546881 SLC38A9Q8NBW4 561 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 OR4K2Q8NGD2 314 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 OR2L2Q8NH16 312 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 OR8K5Q8NH50 307 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 CPT1BQ92523 772 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 PDLIM2Q96JY6 352 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 RMDN2Q96LZ7 410 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 QKIQ96PU8 341 aaKnown RBP eCLIP11.17□□□□□ -0.62
RAB5C-203ENST00000546881 VAT1Q99536 393 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 APOL2Q9BQE5 337 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 DESI2Q9BSY9 194 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 GOLPH3Q9H4A6 298 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 KIR3DX1Q9H7L2 352 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 C10orf88Q9H8K7 445 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 SMOXQ9NWM0 555 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 PLEKHB1Q9UF11 243 aaPredicted RBP11.17□□□□□ -0.62
RAB5C-203ENST00000546881 FKBPLQ9UIM3 349 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 CRLS1Q9UJA2 301 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 G3BP2Q9UN86 482 aaKnown RBP11.17□□□□□ -0.62
RAB5C-203ENST00000546881 TFR2Q9UP52 801 aa11.17□□□□□ -0.62
RAB5C-203ENST00000546881 PCDHGA9Q9Y5G4 932 aaKnown RBP11.17□□□□□ -0.62
RAB5C-203ENST00000546881 MACROD2A1Z1Q3 448 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 TMEM150CB9EJG8 249 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 H7C0C1 242 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 MEN1O00255 615 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 ZNF185O15231 689 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 MAP3K7O43318 606 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 PSTPIP1O43586 416 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 SRP72O76094 671 aaKnown RBP11.16□□□□□ -0.62
RAB5C-203ENST00000546881 TMEM63AO94886 807 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 RALBP11234 206 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 CYP2A7P20853 494 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 LPOP22079 712 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-203ENST00000546881 NDUFS1P28331 727 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 ATP5OP48047 213 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 PREPP48147 710 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 VAV2P52735 878 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 GEMP55040 296 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 TMPRSS15P98073 1019 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 KIF5AQ12840 1032 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 ABRQ12979 859 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 OLIG2Q13516 323 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 RAPSNQ13702 412 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 LAMB3Q13751 1172 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 PRR30Q53SZ7 412 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-203ENST00000546881 TFDP3Q5H9I0 405 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 PLEKHS1Q5SXH7 462 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 CCDC181Q5TID7 509 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 IZUMO3Q5VZ72 239 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 DSELQ8IZU8 1212 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 ZFPM2Q8WW38 1151 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 LCN9Q8WX39 176 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 FERD3LQ96RJ6 166 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 HEMGNQ9BXL5 484 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 KLHL25Q9H0H3 589 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 SRMSQ9H3Y6 488 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 FAM96AQ9H5X1 160 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 ACTR5Q9H9F9 607 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-203ENST00000546881 SLAMF7Q9NQ25 335 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 TRHDEQ9UKU6 1024 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 TCFL5Q9UL49 500 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 ZNF451Q9Y4E5 1061 aa11.16□□□□□ -0.62
RAB5C-203ENST00000546881 hCG_1818297A0A087WSY0 165 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 A1L4Q6 167 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 CCDC66A2RUB6 948 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 HACD1B0YJ81 288 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 DPM1O60762 260 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 ANXA9O76027 345 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 ZRANB2O95218 330 aaKnown RBP eCLIP11.15□□□□□ -0.62
RAB5C-203ENST00000546881 RBL1P28749 1068 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 MARCKSL1P49006 195 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 LMAN1P49257 510 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 TAF1AQ15573 450 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-203ENST00000546881 INPP5JQ15735 1006 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-203ENST00000546881 TAZQ16635 292 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 KYNUQ16719 465 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 PTCHD3Q3KNS1 767 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 BCL7AQ4VC05 210 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 ITPRIPL1Q6GPH6 555 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 TMEM139Q8IV31 216 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 SYTL1Q8IYJ3 562 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 CARFQ8N187 725 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 ACVR1CQ8NER5 493 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 FDCSPQ8NFU4 85 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 OR13C4Q8NGS5 318 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 OR1L3Q8NH93 324 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 HM13Q8TCT9 377 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 SSC4DQ8WTU2 575 aa11.15□□□□□ -0.62
RAB5C-203ENST00000546881 RBM41Q96IZ5 413 aaKnown RBP11.15□□□□□ -0.62
RAB5C-203ENST00000546881 CALR3Q96L12 384 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms