RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 OR56A4Q8NGH8 313 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 KCNJ9Q92806 393 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 BORCS5Q969J3 196 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 TCF12Q99081 682 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 ACTL8Q9H568 366 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 IPPKQ9H8X2 491 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 ZFYVE1Q9HBF4 777 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 DUS2Q9NX74 493 aaKnown RBP14.53□□□□□ -0.08
DDX55-209ENST00000542286 SPATA7Q9P0W8 599 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 CFAP97Q9P2B7 532 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 INTS6Q9UL03 887 aaKnown RBP14.53□□□□□ -0.08
DDX55-209ENST00000542286 CDC14AQ9UNH5 594 aa14.53□□□□□ -0.08
DDX55-209ENST00000542286 TEX28O15482 410 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 TAPBPO15533 448 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 PGLSO95336 258 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 EFEMP2O95967 443 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 UROSP10746 265 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 PCNAP12004 261 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 BPIP17213 487 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 POLR2JP52435 117 aaKnown RBP14.52□□□□□ -0.08
DDX55-209ENST00000542286 C21orf59P57076 290 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 OGFOD2Q6N063 350 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 CMTM8Q8IZV2 173 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 ST13P5Q8NFI4 369 aaPredicted RBP14.52□□□□□ -0.08
DDX55-209ENST00000542286 PBXIP1Q96AQ6 731 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 PLEKHA8Q96JA3 519 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 CDK5RAP1Q96SZ6 601 aaKnown RBP14.52□□□□□ -0.08
DDX55-209ENST00000542286 NEURL2Q9BR09 285 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 ALG2Q9H553 416 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 CLK4Q9HAZ1 481 aaKnown RBP14.52□□□□□ -0.08
DDX55-209ENST00000542286 IL21Q9HBE4 155 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 PCDHA9Q9Y5H5 950 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 FADS3Q9Y5Q0 445 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 INSL5Q9Y5Q6 135 aa14.52□□□□□ -0.08
DDX55-209ENST00000542286 MAGED1Q9Y5V3 778 aaPredicted RBP14.52□□□□□ -0.08
DDX55-209ENST00000542286 A0A1W2PP18 115 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 A0A1W2PRU2 124 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 NPIPB15A6NHN6 443 aaPredicted RBP14.52□□□□□ -0.09
DDX55-209ENST00000542286 FFAR2O15552 330 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 HTRA2O43464 458 aaPredicted RBP14.52□□□□□ -0.09
DDX55-209ENST00000542286 BMP10O95393 424 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 ZBTB11O95625 1053 aaPredicted RBP14.52□□□□□ -0.09
DDX55-209ENST00000542286 SOD2P04179 222 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 ZNF12P17014 697 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 HMGCLP35914 325 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 ATP4BP51164 291 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 LMAN2Q12907 356 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 PPP1R8Q12972 351 aaKnown RBP14.52□□□□□ -0.09
DDX55-209ENST00000542286 VEPH1Q14D04 833 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 NANOGP8Q6NSW7 305 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 OFCC1Q8IZS5 231 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 CENPSQ8N2Z9 138 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 ROPN1LQ96C74 230 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 MYRFLQ96LU7 910 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 CLPBQ9H078 707 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 NANOGQ9H9S0 305 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 ABCD2Q9UBJ2 740 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 ITGB1BP2Q9UKP3 347 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 RIMKLBQ9ULI2 386 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 OAZ3Q9UMX2 235 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 CCL26Q9Y258 94 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 BACE2Q9Y5Z0 518 aa14.52□□□□□ -0.09
DDX55-209ENST00000542286 UPK3BL1B0FP48 263 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 UPK3BL2E5RIL1 263 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 K7EPI3 171 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 HOXA2O43364 376 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 KLK8O60259 260 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ZNF821O75541 412 aaPredicted RBP14.51□□□□□ -0.09
DDX55-209ENST00000542286 PRR35P0CG20 571 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ACRP10323 421 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 PTGER3P43115 390 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 CACNG1Q06432 222 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 TRAP1Q12931 704 aaKnown RBP14.51□□□□□ -0.09
DDX55-209ENST00000542286 GTF2H2Q13888 395 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 RCAN2Q14206 197 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ZBED5Q49AG3 693 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 GTF2H2CQ6P1K8 395 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 XKR5Q6UX68 686 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 FIBCD1Q8N539 461 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 FAM47BQ8NA70 645 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 HM13Q8TCT9 377 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ASB2Q96Q27 587 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 RPF2Q9H7B2 306 aaKnown RBP14.51□□□□□ -0.09
DDX55-209ENST00000542286 LATS2Q9NRM7 1088 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 COMMD8Q9NX08 183 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 SLC8A2Q9UPR5 921 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 MICAL3Q7RTP6 2002 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 H0YJX3 145 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ATE1O95260 518 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 HOXB8P17481 243 aaPredicted RBP14.51□□□□□ -0.09
DDX55-209ENST00000542286 ITGB8P26012 769 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 TMED10P49755 219 aaKnown RBP14.51□□□□□ -0.09
DDX55-209ENST00000542286 RPL38P63173 70 aaKnown RBP14.51□□□□□ -0.09
DDX55-209ENST00000542286 ATP1A4Q13733 1029 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 POM121L1PQ3SYA9 428 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ATP6AP1LQ52LC2 224 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ADGRG5Q8IZF4 528 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 RNF175Q8N4F7 328 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 KRTCAP2Q8N6L1 136 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms