RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 ZNF778Q96MU6 729 aa20.81■□□□□ 0.92
UBE2D3-229ENST00000510129 OCIAD1Q9NX40 245 aa20.81■□□□□ 0.92
UBE2D3-229ENST00000510129 SAMD15Q9P1V8 674 aa20.81■□□□□ 0.92
UBE2D3-229ENST00000510129 CFAP20Q9Y6A4 193 aaKnown RBP20.81■□□□□ 0.92
UBE2D3-229ENST00000510129 OR5K3A6NET4 321 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 POLR1CO15160 346 aaPredicted RBP20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 CD3EAPO15446 510 aaKnown RBP20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 PRSS56P0CW18 603 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 VPS41P49754 854 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 PRKAA1Q13131 559 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 CACHD1Q5VU97 1274 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 MRNIPQ6NTE8 343 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 DTX1Q86Y01 620 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 ELMO1Q92556 727 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 UBL7Q96S82 380 aaPredicted RBP20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 TRIT1Q9H3H1 467 aaKnown RBP20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 SEMA5BQ9P283 1151 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 SOX13Q9UN79 622 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 B3GALT1Q9Y5Z6 326 aa20.8■□□□□ 0.92
UBE2D3-229ENST00000510129 ZZEF1O43149 2961 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 MGAT1P26572 445 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 LEPRP48357 1165 aaKnown RBP20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 GNG11P61952 73 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 MANEAQ5SRI9 462 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 RNF187Q5TA31 235 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 XKR5Q6UX68 686 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 ZNF534Q76KX8 674 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 SDCCAG8Q86SQ7 713 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 BPHLQ86WA6 291 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 ZFAND4Q86XD8 727 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 ZSCAN1Q8NBB4 408 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 NAT14Q8WUY8 206 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 KLHL6Q8WZ60 621 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 TFGQ92734 400 aaPredicted RBP20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 RUNDC3BQ96NL0 473 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 PANX3Q96QZ0 392 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 FERD3LQ96RJ6 166 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 CARD6Q9BX69 1037 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 TFB2MQ9H5Q4 396 aaKnown RBP20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 HRASLS2Q9NWW9 162 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 POLG2Q9UHN1 485 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 VPS9D1Q9Y2B5 631 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 NEU2Q9Y3R4 380 aa20.79■□□□□ 0.92
UBE2D3-229ENST00000510129 TLCD2A6NGC4 264 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 SDR42E2A6NKP2 422 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 K7ENP7 123 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 PRMT5O14744 637 aaPredicted RBP20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 KPNA5O15131 536 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 ARL4DP49703 201 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 CRADDP78560 199 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 RHDQ02161 417 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 PPP1R7Q15435 360 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 DNTTIP2Q5QJE6 756 aaKnown RBP20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 ANKS6Q68DC2 871 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 INO80CQ6PI98 192 aaPredicted RBP20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 FAM92BQ6ZTR7 304 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 LILRA3Q8N6C8 439 aaPredicted RBP20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 LSM14AQ8ND56 463 aaKnown RBP20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 ASZ1Q8WWH4 475 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 LCN9Q8WX39 176 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 CPT1BQ92523 772 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 SLCO2A1Q92959 643 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 TCF12Q99081 682 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 SRMSQ9H3Y6 488 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 SYBUQ9NX95 663 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 SIDT1Q9NXL6 827 aaKnown RBP20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 GNPTGQ9UJJ9 305 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 WDFY3Q8IZQ1 3526 aa20.78■□□□□ 0.92
UBE2D3-229ENST00000510129 UBA6A0AVT1 1052 aaPredicted RBP20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 MAP3K7O43318 606 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 NDUFS3O75489 264 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 APOA4P06727 396 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 NELFEP18615 380 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 FOXM1Q08050 763 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 BOP1Q14137 746 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 TMED2Q15363 201 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 KIAA0930Q6ICG6 404 aaPredicted RBP20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 DUS1LQ6P1R4 473 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 CASC4Q6P4E1 433 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 PCGF5Q86SE9 256 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 SLC41A2Q96JW4 573 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 NAPGQ99747 312 aaPredicted RBP20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 CPNE5Q9HCH3 593 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 PDE7BQ9NP56 450 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 RNF14Q9UBS8 474 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 SAR1BQ9Y6B6 198 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 PRSS21Q9Y6M0 314 aa20.77■□□□□ 0.92
UBE2D3-229ENST00000510129 BPTFQ12830 3046 aa20.77■□□□□ 0.91
UBE2D3-229ENST00000510129 FAM208BQ5VWN6 2430 aa20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 FAM237BA0A1B0GVD1 139 aa20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 SLC5A10A0PJK1 596 aa20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 OR6C74A6NCV1 312 aa20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 OR1I1O60431 355 aa20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 VAPBO95292 243 aa20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 RPN2P04844 631 aa20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 RPS3P23396 243 aaKnown RBP eCLIP20.76■□□□□ 0.915e-12■□□□□ 9.4
UBE2D3-229ENST00000510129 MAP4P27816 1152 aaKnown RBP20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 NMBRP28336 390 aa20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 PREPP48147 710 aa20.76■□□□□ 0.91
UBE2D3-229ENST00000510129 SEPHS1P49903 392 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms