RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SIRPGQ9P1W8 387 aa14.63□□□□□ -0.07
CDC42SE1-203ENST00000470278 KLHL42Q9P2K6 505 aa14.63□□□□□ -0.07
CDC42SE1-203ENST00000470278 SLC17A6Q9P2U8 582 aa14.63□□□□□ -0.07
CDC42SE1-203ENST00000470278 MED16Q9Y2X0 877 aa14.63□□□□□ -0.07
CDC42SE1-203ENST00000470278 PCDHGA1Q9Y5H4 931 aa14.63□□□□□ -0.07
CDC42SE1-203ENST00000470278 ASXL3Q9C0F0 2248 aa14.63□□□□□ -0.07
CDC42SE1-203ENST00000470278 SLC5A10A0PJK1 596 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 IQCF5A8MTL0 148 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 SNX2O60749 519 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 GPC4O75487 556 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 AHSGP02765 367 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 ABHD2P08910 425 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 SLC35G4P0C7Q5 338 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 MYBL2P10244 700 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 PNLIPP16233 465 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 CD9P21926 228 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 AOAHP28039 575 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 FMO4P31512 558 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 HALP42357 657 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 UBE2IP63279 158 aaKnown RBP14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 DAB2P98082 770 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 TMED2Q15363 201 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 SEPT7Q16181 437 aaKnown RBP14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 KYNUQ16719 465 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 SYTL3Q4VX76 610 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 ZNF549Q6P9A3 640 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 CNSTQ6PJW8 725 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 TRMT10CQ7L0Y3 403 aaKnown RBP14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 SFTPA2Q8IWL1 248 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 LILRA3Q8N6C8 439 aaPredicted RBP14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 MAPK15Q8TD08 544 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 FBF1Q8TES7 1133 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 ASZ1Q8WWH4 475 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 PATE1Q8WXA2 126 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 AARSD1Q9BTE6 412 aaKnown RBP14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 TXLNGYQ9BZA5 131 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 OR52A5Q9H2C5 316 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 CCDC68Q9H2F9 335 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 SARS2Q9NP81 518 aaKnown RBP14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 POT1Q9NUX5 634 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 PADI4Q9UM07 663 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 PTPRQQ9UMZ3 2332 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 CDYLQ9Y232 598 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 WDR37Q9Y2I8 494 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 PSAT1Q9Y617 370 aa14.62□□□□□ -0.07
CDC42SE1-203ENST00000470278 NIPSNAP2O75323 286 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 SLCO2B1O94956 709 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 TRIM16O95361 564 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 APOA4P06727 396 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 F7P08709 466 aaPredicted RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 CDK4P11802 303 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 XRCC1P18887 633 aaPredicted RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 MCM3P25205 808 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 RPL10P27635 214 aaKnown RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 ATP5DP30049 168 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 CLCN7P51798 805 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 BOP1Q14137 746 aaKnown RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 GBX1Q14549 363 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 KBTBD12Q3ZCT8 623 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 PLEKHS1Q5SXH7 462 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 CAPRIN2Q6IMN6 1127 aaKnown RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 GUSBP11Q6P575 273 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 CCNI2Q6ZMN8 369 aaPredicted RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 OTOAQ7RTW8 1153 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 STRA8Q7Z7C7 330 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 SLC9B2Q86UD5 537 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 PDZD3Q86UT5 571 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 ZC3HC1Q86WB0 502 aaKnown RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 MARCH9Q86YJ5 346 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 RBM12BQ8IXT5 1001 aaKnown RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 GSPT2Q8IYD1 628 aaKnown RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 SLC22A15Q8IZD6 547 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 KRT222Q8N1A0 295 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 ARL14Q8N4G2 192 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 TMEM159Q96B96 161 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 RMDN2Q96LZ7 410 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 CPNE1Q99829 537 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 RHOJQ9H4E5 214 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 STN1Q9H668 368 aaKnown RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 ACSS3Q9H6R3 686 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 UCK1Q9HA47 277 aa14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 SCHIP1Q9P0W5 487 aaPredicted RBP14.61□□□□□ -0.07
CDC42SE1-203ENST00000470278 CXorf49A8MYA2 514 aaPredicted RBP14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 E5RI56 91 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 RFPL3O75679 317 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 FAM153BP0C7A2 387 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 MTHFD1P11586 935 aaKnown RBP14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 GP5P40197 560 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 GPR3P46089 330 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 PREPP48147 710 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 CSE1LP55060 971 aaKnown RBP14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 MAZP56270 477 aaKnown RBP14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 VSNL1P62760 191 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 HHEXQ03014 270 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 DNAJC3Q13217 504 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 CLCA4Q14CN2 919 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 ERCC6LQ2NKX8 1250 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 FAM153CQ494X1 144 aa14.6□□□□□ -0.07
CDC42SE1-203ENST00000470278 FAM45BPQ6NSW5 357 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms