RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 NAB1Q13506 487 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 RPE65Q16518 533 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 ERCC6LQ2NKX8 1250 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 SYTL3Q4VX76 610 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 PLEKHS1Q5SXH7 462 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 RBM20Q5T481 1227 aaKnown RBP14.07□□□□□ -0.16
CSTF3-202ENST00000431742 WDR93Q6P2C0 686 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 NAPRTQ6XQN6 538 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 CCNI2Q6ZMN8 369 aaPredicted RBP14.07□□□□□ -0.16
CSTF3-202ENST00000431742 STRA8Q7Z7C7 330 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 SLCO6A1Q86UG4 719 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 ZC3HC1Q86WB0 502 aaKnown RBP14.07□□□□□ -0.16
CSTF3-202ENST00000431742 GIMAP7Q8NHV1 300 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 UBXN4Q92575 508 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 CCDC74AQ96AQ1 378 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 TMEM159Q96B96 161 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 INSM2Q96T92 566 aaPredicted RBP14.07□□□□□ -0.16
CSTF3-202ENST00000431742 NDNQ99608 321 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 CCDC68Q9H2F9 335 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 RHOJQ9H4E5 214 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 ACSS3Q9H6R3 686 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 POT1Q9NUX5 634 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 KLHL42Q9P2K6 505 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 GALPQ9UBC7 116 aa14.07□□□□□ -0.16
CSTF3-202ENST00000431742 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.07□□□□□ -0.16
CSTF3-202ENST00000431742 V9GYY5 206 aaPredicted RBP14.07□□□□□ -0.16
CSTF3-202ENST00000431742 TRBV23OR9-2A0A075B6M9 112 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 CPED1A4D0V7 1026 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 RFPL3O75679 317 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 ACSL3O95573 720 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 APOA4P06727 396 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 ABHD2P08910 425 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 ACADLP28330 430 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 ATP5DP30049 168 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 CSE1LP55060 971 aaKnown RBP14.06□□□□□ -0.16
CSTF3-202ENST00000431742 HHEXQ03014 270 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 ILF2Q12905 390 aaKnown RBP14.06□□□□□ -0.16
CSTF3-202ENST00000431742 EFTUD2Q15029 972 aaKnown RBP eCLIP14.06□□□□□ -0.16
CSTF3-202ENST00000431742 TMED2Q15363 201 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 TRMT10CQ7L0Y3 403 aaKnown RBP14.06□□□□□ -0.16
CSTF3-202ENST00000431742 OTOAQ7RTW8 1153 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 SLC9B2Q86UD5 537 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 VRK3Q8IV63 474 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 ZBTB2Q8N680 514 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 CD200R1Q8TD46 325 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 C12orf66Q96MD2 445 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 SLC30A3Q99726 388 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 CPNE1Q99829 537 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 EPB41L4BQ9H329 900 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 UCK1Q9HA47 277 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 RRAGDQ9NQL2 400 aaPredicted RBP14.06□□□□□ -0.16
CSTF3-202ENST00000431742 LRIT1Q9P2V4 623 aa14.06□□□□□ -0.16
CSTF3-202ENST00000431742 PRAMEF33A0A0G2JMD5 474 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 LILRA5A6NI73 299 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 E5RI56 91 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 CHRM3P20309 590 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 FDXRP22570 491 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 GP5P40197 560 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 GPR3P46089 330 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 PMS2P54278 862 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 CDKN2DP55273 166 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 HSPA14Q0VDF9 509 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 BRD3Q15059 726 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 PPM1JQ5JR12 505 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 DUS1LQ6P1R4 473 aaKnown RBP14.05□□□□□ -0.16
CSTF3-202ENST00000431742 SPRED1Q7Z699 444 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 ACVR1CQ8NER5 493 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 FAM136AQ96C01 138 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 CXorf40BQ96DE9 158 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 VPS39Q96JC1 886 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 CYTH2Q99418 400 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 GPR21Q99679 349 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 RBBP8Q99708 897 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 CCDC3Q9BQI4 270 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 STN1Q9H668 368 aaKnown RBP14.05□□□□□ -0.16
CSTF3-202ENST00000431742 SLC40A1Q9NP59 571 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 IMP3Q9NV31 184 aaKnown RBP14.05□□□□□ -0.16
CSTF3-202ENST00000431742 APOBEC2Q9Y235 224 aaKnown RBP14.05□□□□□ -0.16
CSTF3-202ENST00000431742 DHRS7Q9Y394 339 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 ADAMTS20P59510 1910 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 ANKRD12Q6UB98 2062 aa14.05□□□□□ -0.16
CSTF3-202ENST00000431742 RHPN2P1A8MT19 583 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 IFRD1O00458 451 aaPredicted RBP14.04□□□□□ -0.16
CSTF3-202ENST00000431742 RIPK2O43353 540 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 VPS26AO75436 327 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 SNRNP200O75643 2136 aaKnown RBP14.04□□□□□ -0.16
CSTF3-202ENST00000431742 VIPP01282 170 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 CDK4P11802 303 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 LIMK2P53671 638 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 ACSBG2Q5FVE4 666 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 HECTD2Q5U5R9 776 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 FAM45BPQ6NSW5 357 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 TMEM26Q6ZUK4 368 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 PIM3Q86V86 326 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 TRIM48Q8IWZ4 208 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 CTAGE3PQ8IX95 158 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 RBM12BQ8IXT5 1001 aaKnown RBP14.04□□□□□ -0.16
CSTF3-202ENST00000431742 PPM1NQ8N819 430 aa14.04□□□□□ -0.16
CSTF3-202ENST00000431742 SIDT2Q8NBJ9 832 aaKnown RBP14.04□□□□□ -0.16
CSTF3-202ENST00000431742 FAM45AQ8TCE6 357 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms