RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SELPLGQ14242 412 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 FSCN1Q16658 493 aaKnown RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 PDE12Q6L8Q7 609 aaKnown RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 NOTUMQ6P988 496 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 FAM131AQ6UXB0 335 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 GPRIN3Q6ZVF9 776 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 ADHFE1Q8IWW8 467 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 KRTCAP2Q8N6L1 136 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 OR52B6Q8NGF0 335 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 PSMG2Q969U7 264 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 ASIC4Q96FT7 647 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SH3YL1Q96HL8 342 aaPredicted RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 SENP8Q96LD8 212 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 TEX37Q96LM6 180 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 GPR22Q99680 433 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SLC39A8Q9C0K1 460 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 MMP28Q9H239 520 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 TMEM134Q9H6X4 195 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 ZNF556Q9HAH1 456 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 RHCGQ9UBD6 479 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 DKK3Q9UBP4 350 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 NOX1Q9Y5S8 564 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 CLCA3PQ9Y6N3 262 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 MAGEB16A2A368 324 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 VPS26AO75436 327 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 FYNP06241 537 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 PIGAP37287 484 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SCNN1GP51170 649 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 CDKN2DP55273 166 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 BNIP2Q12982 314 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 RAPSNQ13702 412 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 APOFQ13790 326 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 GANABQ14697 944 aaKnown RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 TPRG1LQ5T0D9 272 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 TXNDC11Q6PKC3 985 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 OTOP2Q7RTS6 562 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 TAC4Q86UU9 113 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SLC34A3Q8N130 599 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 STK40Q8N2I9 435 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 CLDN19Q8N6F1 224 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 APOLD1Q96LR9 279 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SEZ6LQ9BYH1 1024 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 REEP1Q9H902 201 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 RAPGEFL1Q9UHV5 662 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 ZNF222Q9UK12 451 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SATB2Q9UPW6 733 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 TNFSF13BQ9Y275 285 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 LOC100130705A0A1B0GUX0 176 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SLC12A8A0AV02 714 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 FAM25AB3EWG3 89 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 FAM25CB3EWG5 89 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 FAM25GB3EWG6 89 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 ZNF195O14628 629 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 CD3EAPO15446 510 aaKnown RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 ABCB7O75027 752 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 CDK14O94921 469 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 AP2A2O94973 939 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 MLNP12872 115 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 KCNC1P48547 511 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 PRIM2P49643 509 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 HTR6P50406 440 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 MLLT10P55197 1068 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 MBTD1Q05BQ5 628 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 INAVAQ3KP66 663 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 TBRG1Q3YBR2 411 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SPANXN4Q5MJ08 99 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 C6orf141Q5SZD1 244 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 GPRIN1Q7Z2K8 1008 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 ANKRD13BQ86YJ7 626 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SOCS4Q8WXH5 440 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 DPH2Q9BQC3 489 aaPredicted RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 TINF2Q9BSI4 451 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 RBM38Q9H0Z9 239 aaKnown RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 ELOVL6Q9H5J4 265 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 ASB7Q9H672 318 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 CATSPERBQ9H7T0 1116 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 AGO3Q9H9G7 860 aaKnown RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 CATSPERZQ9NTU4 200 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 CCM2LQ9NUG4 571 aaPredicted RBP8.69□□□□□ -1.02
RTN4-206ENST00000394611 TBCCD1Q9NVR7 557 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 TAS2R16Q9NYV7 291 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 SRRDQ9UH36 339 aa8.69□□□□□ -1.02
RTN4-206ENST00000394611 A0A087X1B8 175 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 MTSS1O43312 755 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 SNAI1O95863 264 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 LGALS2P05162 132 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 BMP4P12644 408 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 IDO1P14902 403 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TCF3P15923 654 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 OR1E2P47887 323 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TUBA4AP68366 448 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 VASH1Q7L8A9 365 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 TLK2Q86UE8 772 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 ELMOD2Q8IZ81 293 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TTC29Q8NA56 475 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 TRIB2Q92519 343 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 PCYT2Q99447 389 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms