RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 KRT36O76013 467 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 LATS1O95835 1130 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 IMPDH1P20839 514 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 IVDP26440 423 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 ARSDP51689 593 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 HERVK_113P63132 956 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 HMGCS1Q01581 520 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 RALGDSQ12967 914 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 RALGPS2Q86X27 583 aaPredicted RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 ERVK-6Q9BXR3 956 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 ZNF232Q9UNY5 417 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 AP3M1Q9Y2T2 418 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 CEBPBP17676 345 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 IL4RP24394 825 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 CAPZA2P47755 286 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 CLK1P49759 484 aaKnown RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 IDH3AP50213 366 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 MAPK12P53778 367 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 FAM189BP81408 668 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 NFATC2Q13469 925 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 TEAD4Q15561 434 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 AMZ1Q400G9 498 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 LRRC74BQ6ZQY2 392 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 PNPLA1Q8N8W4 532 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 CLPTM1LQ96KA5 538 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 TUBGCP5Q96RT8 1024 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 SMAD5Q99717 465 aaKnown RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 REEP1Q9H902 201 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 MAGEE1Q9HCI5 957 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 CLOCKO15516 846 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 KRT75O95678 551 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 GRIA2P42262 883 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 ADAM17P78536 824 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 TMEM115Q12893 351 aaPredicted RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 EIF4HQ15056 248 aaKnown RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 TRIM40Q6P9F5 258 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 PLD6Q8N2A8 252 aaKnown RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 CHST14Q8NCH0 376 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 SRFBP1Q8NEF9 429 aaKnown RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 FGF13Q92913 245 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 LAMB1P07942 1786 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 TMEM233B4DJY2 109 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 SAP18O00422 153 aaKnown RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 KERAO60938 352 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 ANXA6P08133 673 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 MYOGP15173 224 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 ALDH4A1P30038 563 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC6A4P31645 630 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 MINDY4Q4G0A6 757 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 PAOXQ6QHF9 649 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 C2CD4AQ8NCU7 369 aaPredicted RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 OR4A15Q8NGL6 344 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 ZNF334Q9HCZ1 680 aaPredicted RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 KRCC1Q9NPI7 259 aaPredicted RBP12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 MTMR10Q9NXD2 777 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 PCDH10Q9P2E7 1040 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 FBXW2Q9UKT8 454 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 PPM1HQ9ULR3 514 aa12.89□□□□□ -0.35
PTPRN2-202ENST00000389416 B4DGG1 531 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 NOS3P29474 1203 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 GNA13Q14344 377 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 MBTPS1Q14703 1052 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 XKR4Q5GH76 650 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 ANXA8L1Q5VT79 327 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 AMIGO2Q86SJ2 522 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 THAP11Q96EK4 314 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 PTCD3Q96EY7 689 aaKnown RBP12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 MARCH4Q9P2E8 410 aaPredicted RBP12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 PIAS3Q9Y6X2 628 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 A0A0U1RQS6 177 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 SMAD6O43541 496 aaKnown RBP12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC35G6P0C7Q6 338 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 LRRC32Q14392 662 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 CYP2U1Q7Z449 544 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 PRSS58Q8IYP2 241 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 TMEM145Q8NBT3 493 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 OR2T12Q8NG77 320 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 XAGE5Q8WWM1 108 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 RIBC2Q9H4K1 309 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 RNPEPL1Q9HAU8 725 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 CDV3Q9UKY7 258 aaKnown RBP12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 E7ESA3 106 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 BDKRB1P46663 353 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 HPS6Q86YV9 775 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 DLG3Q92796 817 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 RETREG1Q9H6L5 497 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 C1orf109Q9NX04 203 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 CXXC1Q9P0U4 656 aaPredicted RBP12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 CDH7Q9ULB5 785 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 COL4A5P29400 1685 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 LCHNA4D1U4 455 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 H0YGN5 161 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 GRID2O43424 1007 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 CHRM1P11229 460 aaPredicted RBP12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 CD68P34810 354 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms