RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 TMEM175Q9BSA9 504 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.32□□□□□ -1.08
PTPRK-206ENST00000368215 TPRKBQ9Y3C4 175 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 DYTNA2CJ06 578 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 AQP12BA6NM10 295 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 hCG_2039718K7EN88 272 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 FPGTO14772 594 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 RGS5O15539 181 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 TRMUO75648 421 aaKnown RBP8.32□□□□□ -1.08
PTPRK-206ENST00000368215 CYP4F3Q08477 520 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 MERTKQ12866 999 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 LAPTM5Q13571 262 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 CBX2Q14781 532 aaPredicted RBP8.32□□□□□ -1.08
PTPRK-206ENST00000368215 PAGE2BQ5JRK9 111 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 SPANXN4Q5MJ08 99 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 FAM91A1Q658Y4 838 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 DENND5AQ6IQ26 1287 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 BEND5Q7L4P6 421 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 BBS7Q8IWZ6 715 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 AQP12AQ8IXF9 295 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 PIANPQ8IYJ0 282 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 KCNJ9Q92806 393 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 REPS1Q96D71 796 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 SOX17Q9H6I2 414 aaPredicted RBP8.32□□□□□ -1.08
PTPRK-206ENST00000368215 AHSPQ9NZD4 102 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 SLC22A14Q9Y267 594 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 NUMBLQ9Y6R0 609 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 QSER1Q2KHR3 1735 aa8.32□□□□□ -1.08
PTPRK-206ENST00000368215 H3BN98 237 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 H3BSA7 217 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 CXCR6O00574 342 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 SLC9A3R1O14745 358 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 KDM1AO60341 852 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 IFNA14P01570 189 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 C21orf59P57076 290 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 IRF5Q13568 498 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 TRIM60Q495X7 471 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 CPTPQ5TA50 214 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 TMEM220Q6QAJ8 160 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.31□□□□□ -1.083e-7■■■■■ 27
PTPRK-206ENST00000368215 SH2D5Q6ZV89 423 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 KBTBD6Q86V97 674 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 ZNF540Q8NDQ6 660 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 PLEKHA8Q96JA3 519 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 NSMCE3Q96MG7 304 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 PLEKHG4BQ96PX9 1271 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 BOCQ9BWV1 1114 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 GSTO2Q9H4Y5 243 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 LIN28AQ9H9Z2 209 aaKnown RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 DOCK1Q14185 1865 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 MUSKO15146 869 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 ADAMTS4O75173 837 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 ANXA4P09525 319 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 VARSP26640 1264 aaKnown RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 PRDX3P30048 256 aaKnown RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 CPOXP36551 454 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 HPCAP84074 193 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 CYP2A13Q16696 494 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 SDE2Q6IQ49 451 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 CYP2U1Q7Z449 544 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 SLC15A3Q8IY34 581 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 ARRDC2Q8TBH0 407 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 CXorf40AQ8TE69 158 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 C3orf30Q96M34 536 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 SMAD5Q99717 465 aaKnown RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 GORASP1Q9BQQ3 440 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 HEPHQ9BQS7 1158 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 OSBPL6Q9BZF3 934 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 CERS4Q9HA82 394 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 GIMAP4Q9NUV9 329 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 INTS7Q9NVH2 962 aaKnown RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 RPS6KA6Q9UK32 745 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 SIPA1L1O43166 1804 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 SDK1Q7Z5N4 2213 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 SCAMP1O15126 338 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 SERPINA1P01009 418 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 PABPC1P11940 636 aaKnown RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 GRK3P35626 688 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 ADAM17P78536 824 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 CHSY3Q70JA7 882 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 APCDD1Q8J025 514 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 GALNT15Q8N3T1 639 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 DCAF4L2Q8NA75 395 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 AURKBQ96GD4 344 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 TEX12Q9BXU0 123 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 TRIM45Q9H8W5 580 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-206ENST00000368215 ACTR3BQ9P1U1 418 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 AP3M1Q9Y2T2 418 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 SQORQ9Y6N5 450 aa8.31□□□□□ -1.08
PTPRK-206ENST00000368215 H0Y858 1186 aa8.3□□□□□ -1.08
PTPRK-206ENST00000368215 SAP18O00422 153 aaKnown RBP8.3□□□□□ -1.08
PTPRK-206ENST00000368215 ATG13O75143 517 aa8.3□□□□□ -1.08
PTPRK-206ENST00000368215 SOD2P04179 222 aa8.3□□□□□ -1.08
PTPRK-206ENST00000368215 UMPSP11172 480 aa8.3□□□□□ -1.08
PTPRK-206ENST00000368215 ADRA1AP35348 466 aa8.3□□□□□ -1.08
PTPRK-206ENST00000368215 HNF1BP35680 557 aa8.3□□□□□ -1.08
PTPRK-206ENST00000368215 HTR6P50406 440 aa8.3□□□□□ -1.08
PTPRK-206ENST00000368215 GALK1P51570 392 aa8.3□□□□□ -1.08
PTPRK-206ENST00000368215 EPS8Q12929 822 aa8.3□□□□□ -1.08
PTPRK-206ENST00000368215 SGCGQ13326 291 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms