RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ZNF789Q5FWF6 425 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 TTI2Q6NXR4 508 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 ADGRG6Q86SQ4 1221 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 ACBD4Q8NC06 268 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 SMARCE1Q969G3 411 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 VPS50Q96JG6 964 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 WDR24Q96S15 920 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 SMR3AQ99954 134 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 MGME1Q9BQP7 344 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 SELENOOQ9BVL4 669 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 AP1M1Q9BXS5 423 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 MEMO1Q9Y316 297 aa10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 FBN1P35555 2871 aaKnown RBP10.67□□□□□ -0.7
PTP4A1-207ENST00000639568 C1orf232A0A0U1RR37 186 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 RGSL1A5PLK6 1076 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 CDK14O94921 469 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 UMODP07911 640 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 MSL3P1P0C860 447 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 CBSLP0DN79 551 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 MYBL2P10244 700 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 MMP11P24347 488 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 PON1P27169 355 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 CBSP35520 551 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 NOMO3P69849 1222 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 ITKQ08881 620 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 RPE65Q16518 533 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 ANKRD20A8PQ5CZ79 823 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 ZFYVE27Q5T4F4 411 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 ZNF385CQ66K41 422 aaPredicted RBP10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 ISM2Q6H9L7 571 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 ARHGAP12Q8IWW6 846 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 PGBD5Q8N414 524 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 DNAAF3Q8N9W5 541 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 GPR150Q8NGU9 434 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 SUN3Q8TAQ9 357 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 NELFBQ8WX92 580 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 C18orf12Q96KH6 178 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 PPM1MQ96MI6 270 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 C1GALT1Q9NS00 363 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 IMP3Q9NV31 184 aaKnown RBP10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 COQ3Q9NZJ6 369 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 PSMD13Q9UNM6 376 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 CDYLQ9Y232 598 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 AP1M2Q9Y6Q5 423 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 ABCA4P78363 2273 aa10.66□□□□□ -0.7
PTP4A1-207ENST00000639568 GADD45BO75293 160 aaPredicted RBP10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 FGFR1OPO95684 399 aaKnown RBP10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 UQCRHP07919 91 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 MMEP08473 750 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 ERCC2P18074 760 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 POLR2CP19387 275 aaPredicted RBP10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 UGT1A4P22310 534 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 MMP8P22894 467 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 DNASE1P24855 282 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 MMP13P45452 471 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 TNFSF10P50591 281 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 FOXL2P58012 376 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 ADAM8P78325 824 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 DMPKQ09013 629 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 MYBPHQ13203 477 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 XRCC4Q13426 336 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 GALNT3Q14435 633 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 MARC1Q5VT66 337 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 WDR59Q6PJI9 974 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 RFX8Q6ZV50 586 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 TRAPPC5Q8IUR0 188 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 NPWQ8N729 165 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 PROKR1Q8TCW9 393 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 ZFPM2Q8WW38 1151 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 SDCCAG3Q96C92 435 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 C11orf70Q9BRQ4 267 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 NAA15Q9BXJ9 866 aaKnown RBP10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 GOLPH3LQ9H4A5 285 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 CBX8Q9HC52 389 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 TXLNGQ9NUQ3 528 aa10.65□□□□□ -0.7
PTP4A1-207ENST00000639568 C17orf113A0A1B0GUU1 675 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 GSAPA4D1B5 854 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 FAM171A2A8MVW0 826 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 EIF3CLB5ME19 914 aaKnown RBP10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 MATN2O00339 956 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 CCP110O43303 1012 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 FZD6O60353 706 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 PRAMEF2O60811 474 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 KCNJ13O60928 360 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 MTX2O75431 263 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 OR2B3O76000 313 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 KLHL18O94889 574 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 MLYCDO95822 493 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 HLA-DPA1P20036 260 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 CA4P22748 312 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 LMAN1P49257 510 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 ZNF143P52747 638 aaPredicted RBP10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 DGKQP52824 942 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 GTF2H3Q13889 308 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 TUBB8Q3ZCM7 444 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 NKAIN1Q4KMZ8 207 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 PPP1R15BQ5SWA1 713 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 ALS2CLQ60I27 953 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 RHBDD2Q6NTF9 364 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms