RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ITGA7Q13683 1181 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ECM1Q16610 540 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 NUP54Q7Z3B4 507 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 VTCN1Q7Z7D3 282 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 FAM35AQ86V20 835 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CREG2Q8IUH2 290 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 MSL3Q8N5Y2 521 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 LMX1AQ8TE12 382 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CRNNQ9UBG3 495 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ASTN1O14525 1302 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 TEX46H3BTG2 121 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 GRM6O15303 877 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 MYCLP1P12525 358 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CSTF2P33240 577 aaKnown RBP eCLIP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CCR10P46092 362 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 PDGFRLQ15198 375 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 IL17AQ16552 155 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 KANK2Q63ZY3 851 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 RNF43Q68DV7 783 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CLEC6AQ6EIG7 209 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 C1orf186Q6ZWK4 172 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CMC1Q7Z7K0 106 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 COLEC10Q9Y6Z7 277 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CARNS1A5YM72 827 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 FAM86C2PA6NEL3 165 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF143P52747 638 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 MTFR2Q6P444 385 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ESAMQ96AP7 390 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 RXRGP48443 463 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CSTF1Q05048 431 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 TMEM63BQ5T3F8 832 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 AAGABQ6PD74 315 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 KCTD9Q7L273 389 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 KATNAL2Q8IYT4 538 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF101Q8IZC7 436 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 SLC35C1Q96A29 364 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CHADO15335 359 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ACSL1P33121 698 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 GCNT1Q02742 428 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 TAF10Q12962 218 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CPTPQ5TA50 214 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 C9orf57Q5W0N0 161 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 DCLRE1AQ6PJP8 1040 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ATAD1Q8NBU5 361 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CAVIN3Q969G5 261 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 FCRL2Q96LA5 508 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 LPIN3Q9BQK8 851 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ADAM28Q9UKQ2 775 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 TNPO3Q9Y5L0 923 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 TREHO43280 583 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 COX4I1P13073 169 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 NDUFA9Q16795 377 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 UBXN11Q5T124 520 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ANO7Q6IWH7 933 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 RBM44Q6ZP01 1051 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 ELOA2Q8IYF1 753 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 THEM6Q8WUY1 208 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 TRAPPC9Q96Q05 1148 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 REV1Q9UBZ9 1251 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 CLUHO75153 1309 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 A6NCN8 305 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 FOXO6A8MYZ6 492 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 ALPPL2P10696 532 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 GADD45AP24522 165 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 OR3A3P47888 321 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 OR3A2P47893 321 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 SLC26A5P58743 744 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF460Q14592 562 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 MMP3P08254 477 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 DRD4P21917 467 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 LPOP22079 712 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 C2orf76Q3KRA6 126 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 COMMD4Q9H0A8 199 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 GPN1Q9HCN4 374 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 FAM118AQ9NWS6 357 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 ASTN2O75129 1339 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 C2orf92A0A1B0GVN3 265 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 OR2AT4A6NND4 320 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 TOR1BO14657 336 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 NOL4O94818 638 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 GNSP15586 552 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 METTL3Q86U44 580 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 SLCO6A1Q86UG4 719 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF598Q86UK7 904 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 CAND1Q86VP6 1230 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 GATSQ8NAP1 163 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 STARD8Q92502 1023 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 USP29Q9HBJ7 922 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 ABCB8Q9NUT2 735 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF221Q9UK13 617 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 A0A0U1RQK1 487 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 ACVR2AP27037 513 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 MAPK8P45983 427 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 OAZ1P54368 228 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 OR2L2Q8NH16 312 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 NCSTNQ92542 709 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 RNF157Q96PX1 679 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF649Q9BS31 505 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 IFT27Q9BW83 186 aa16.78■□□□□ 0.28
CACNA1A-253ENST00000637927 BEX2Q9BXY8 128 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms