RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PIP4P1Q86T03 277 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 ADGRG3Q86Y34 549 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 TMEM199Q8N511 208 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 ARFGAP1Q8N6T3 406 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 ACVR1CQ8NER5 493 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 MAGEC3Q8TD91 643 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 ZFAND2BQ8WV99 257 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 OIT3Q8WWZ8 545 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 DNASE1L2Q92874 299 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 URB1-AS1Q96HZ7 61 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 FAM81BQ96LP2 452 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 PARK7Q99497 189 aaKnown RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 CMKLR1Q99788 373 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 UTP14AQ9BVJ6 771 aaKnown RBP4.96□□□□□ -1.62
LINC00397-202ENST00000606785 ACAT2Q9BWD1 397 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 DPAGT1Q9H3H5 408 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 PLAC1Q9HBJ0 212 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 RHCGQ9UBD6 479 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 POLLQ9UGP5 575 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 GRIP1Q9Y3R0 1128 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 HS3ST3B1Q9Y662 390 aa4.96□□□□□ -1.62
LINC00397-202ENST00000606785 A0A1W2PP11 408 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 OR2M5A3KFT3 312 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 TMEM221A6NGB7 291 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 H0YGN5 161 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 CH25HO95992 272 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 FGF2P09038 288 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 EEF2P13639 858 aaKnown RBP4.95□□□□□ -1.62
LINC00397-202ENST00000606785 GNAZP19086 355 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 CD81P60033 236 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 IRX3P78415 501 aaPredicted RBP4.95□□□□□ -1.62
LINC00397-202ENST00000606785 PRKCZQ05513 592 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 ACTN3Q08043 901 aaPredicted RBP4.95□□□□□ -1.62
LINC00397-202ENST00000606785 CRYZQ08257 329 aaKnown RBP4.95□□□□□ -1.62
LINC00397-202ENST00000606785 RCN2Q14257 317 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 UGCGQ16739 394 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 DZIP1Q86YF9 867 aaKnown RBP4.95□□□□□ -1.62
LINC00397-202ENST00000606785 OR5R1Q8NH85 324 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 C16orf52Q8NHV5 167 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 SFXN2Q96NB2 322 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 TSPAN18Q96SJ8 248 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 FEVQ99581 238 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 CPNE1Q99829 537 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 PI4K2AQ9BTU6 479 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 FNDC11Q9BVV2 318 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 MRPL44Q9H9J2 332 aaKnown RBP4.95□□□□□ -1.62
LINC00397-202ENST00000606785 HHATLQ9HCP6 504 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 MID1IP1Q9NPA3 183 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 SEPT10Q9P0V9 454 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 ING1Q9UK53 422 aaPredicted RBP4.95□□□□□ -1.62
LINC00397-202ENST00000606785 CPSF3Q9UKF6 684 aaKnown RBP4.95□□□□□ -1.62
LINC00397-202ENST00000606785 ABCC9O60706 1549 aa4.95□□□□□ -1.62
LINC00397-202ENST00000606785 IGLV5-39A0A0G2JS06 123 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 hDV102S1A0JD36 115 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 C5orf52A6NGY3 159 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 SLC33A1O00400 549 aaPredicted RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 MEIS2O14770 477 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 OR10H2O60403 315 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 KERAO60938 352 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 RBMXL2O75526 392 aaKnown RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 MOCS3O95396 460 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 NUDT3O95989 172 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 AZGP1P25311 298 aaKnown RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 SLC9A3P48764 834 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 STX1BP61266 288 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 POLR2LP62875 67 aaKnown RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 ASIC1P78348 528 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 TROAPQ12815 778 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 ODF3L2Q3SX64 289 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 RAB6CQ53S08 254 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 FNBP1LQ5T0N5 605 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 GCNT6Q5T4J0 391 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 FAM69BQ5VUD6 431 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 PRR27Q6MZM9 219 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 RGMBQ6NW40 437 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 WDR73Q6P4I2 378 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 SHC4Q6S5L8 630 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 FAM219AQ8IW50 185 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 C1orf52Q8N6N3 182 aaKnown RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 NEXN-AS1Q8NBZ9 246 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 PPP4R1Q8TF05 950 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 SLC44A1Q8WWI5 657 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 DDB2Q92466 427 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 TEKT1Q969V4 418 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 MIB2Q96AX9 1013 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 OTUB1Q96FW1 271 aaPredicted RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 TXNDC15Q96J42 360 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 AK8Q96MA6 479 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 QRFPRQ96P65 431 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 MTERF1Q99551 399 aaKnown RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 RAB6CQ9H0N0 254 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 SEMA6AQ9H2E6 1030 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 FOXP1Q9H334 677 aaPredicted RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 FN3KQ9H479 309 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 TMEM206Q9H813 350 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 PCDH9Q9HC56 1237 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 TUFT1Q9NNX1 390 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 MYNNQ9NPC7 610 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 NOX4Q9NPH5 578 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms