RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 PGM1P36871 562 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 RPS18P62269 152 aaKnown RBP1.05□□□□□ -2.24
CEP290-208ENST00000604024 TRA2BP62995 288 aaKnown RBP1.05□□□□□ -2.24
CEP290-208ENST00000604024 PRR30Q53SZ7 412 aaPredicted RBP1.05□□□□□ -2.24
CEP290-208ENST00000604024 NIPA2Q8N8Q9 360 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 SEMA4DQ92854 862 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 PSD2Q9BQI7 771 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 ISCA1Q9BUE6 129 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 PUS3Q9BZE2 481 aaKnown RBP1.05□□□□□ -2.24
CEP290-208ENST00000604024 CPVLQ9H3G5 476 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 NUDT4Q9NZJ9 180 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 COPG2Q9UBF2 871 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 CTNNAL1Q9UBT7 734 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 TBX20Q9UMR3 447 aa1.05□□□□□ -2.24
CEP290-208ENST00000604024 LOC101059948A0A1B0GTJ6 334 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 PHOX2AO14813 284 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 SCAMP1O15126 338 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 IDH3BO43837 385 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 RNASEH1O60930 286 aaKnown RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 CDC123O75794 336 aaPredicted RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 KRT33AO76009 404 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 DFFBO76075 338 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 SLCO2B1O94956 709 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 ACTN1P12814 892 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 CDH2P19022 906 aaPredicted RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 RBMS1P29558 406 aaKnown RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 CDR2Q01850 454 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 SLC12A1Q13621 1099 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 FGFBP1Q14512 234 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 TIGD6Q17RP2 521 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 NOTUMQ6P988 496 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 INO80CQ6PI98 192 aaPredicted RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 C1orf228Q6PIY5 440 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 TMEM64Q6YI46 380 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 DENND5BQ6ZUT9 1274 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 HOGA1Q86XE5 327 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 RAB42Q8N4Z0 105 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 DCLK2Q8N568 766 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 GBGT1Q8N5D6 347 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 POF1BQ8WVV4 589 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 SLC45A3Q96JT2 553 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 PRICKLE1Q96MT3 831 aaPredicted RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 PYM1Q9BRP8 204 aaKnown RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 SLC6A13Q9NSD5 602 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 MUTYHQ9UIF7 546 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 TMEM129A0AVI4 362 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 NBNO60934 754 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 HNRNPA3P51991 378 aaKnown RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 PPIAP62937 165 aaKnown RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 UBE3AQ05086 875 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 COX10Q12887 443 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 RRS1Q15050 365 aaKnown RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 C3AR1Q16581 482 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 NFIL3Q16649 462 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 SPICE1Q8N0Z3 855 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 TMEM178AQ8NBL3 297 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 OR2T11Q8NH01 316 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 HERVK_113Q902F9 699 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 NSL1Q96IY1 281 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 KLHL15Q96M94 604 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 MTMR12Q9C0I1 747 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 INTS9Q9NV88 658 aaKnown RBP1.04□□□□□ -2.24
CEP290-208ENST00000604024 DNAJB4Q9UDY4 337 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 NTNG1Q9Y2I2 539 aa1.04□□□□□ -2.24
CEP290-208ENST00000604024 ASB14A6NK59 587 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 GPRIN2O60269 458 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 SLC25A12O75746 678 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 BMP10O95393 424 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 MGMTP16455 207 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 IL4RP24394 825 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 PIK3CAP42336 1068 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 PIP4K2AP48426 406 aaPredicted RBP1.03□□□□□ -2.24
CEP290-208ENST00000604024 NSUN5P2Q63ZY6 315 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 ARHGAP12Q8IWW6 846 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 SUGP1Q8IWZ8 645 aaKnown RBP1.03□□□□□ -2.24
CEP290-208ENST00000604024 CPSF7Q8N684 471 aaKnown RBP1.03□□□□□ -2.24
CEP290-208ENST00000604024 NFKBIDQ8NI38 313 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 HMGCLL1Q8TB92 370 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 PRAC1Q96KF2 57 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 CNOT6LQ96LI5 555 aaKnown RBP1.03□□□□□ -2.24
CEP290-208ENST00000604024 GLIS2Q9BZE0 524 aaPredicted RBP1.03□□□□□ -2.24
CEP290-208ENST00000604024 CTSZQ9UBR2 303 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 DBNLQ9UJU6 430 aaKnown RBP1.03□□□□□ -2.24
CEP290-208ENST00000604024 KIAA1109Q2LD37 5005 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 OR6C76A6NM76 312 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 LDLRAD4O15165 306 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 CEACAM4O75871 244 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 SEC14L2O76054 403 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 WISP2O76076 250 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 C22orf31O95567 290 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 HPRP00739 348 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 GPIP06744 558 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 HOXD4P09016 255 aaPredicted RBP1.03□□□□□ -2.24
CEP290-208ENST00000604024 HNRNPDQ14103 355 aaKnown RBP1.03□□□□□ -2.24
CEP290-208ENST00000604024 NECTIN1Q15223 517 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 MOGAT2Q3SYC2 334 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 SLC9B1Q4ZJI4 515 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 C20orf194Q5TEA3 1177 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 CDC73Q6P1J9 531 aa1.03□□□□□ -2.24
CEP290-208ENST00000604024 SLC22A25Q6T423 547 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms