RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 CA5BP1Q8WTZ4 195 aa10.31□□□□□ -0.76
LIG1-220ENST00000601091 SOCS4Q8WXH5 440 aa10.31□□□□□ -0.76
LIG1-220ENST00000601091 CRTAC1Q9NQ79 661 aa10.31□□□□□ -0.76
LIG1-220ENST00000601091 WWOXQ9NZC7 414 aa10.31□□□□□ -0.76
LIG1-220ENST00000601091 UBA2Q9UBT2 640 aaPredicted RBP10.31□□□□□ -0.76
LIG1-220ENST00000601091 KLHL3Q9UH77 587 aa10.31□□□□□ -0.76
LIG1-220ENST00000601091 BTRCQ9Y297 605 aa10.31□□□□□ -0.76
LIG1-220ENST00000601091 NUDT19A8MXV4 375 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 CENPBD1B2RD01 187 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 SOCS7O14512 581 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 MLYCDO95822 493 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 PGK1P00558 417 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 F2P00734 622 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 LINC00032P0C843 101 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 IRF1P10914 325 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 RHOQP17081 205 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 CASP9P55211 416 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 SOX4Q06945 474 aaPredicted RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 PTPRNQ16849 979 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 FAM98BQ52LJ0 330 aaKnown RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 REP15Q6BDI9 236 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 ZNF534Q76KX8 674 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 CHERPQ8IWX8 916 aaKnown RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 C7orf61Q8IZ16 206 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 Q8N9G6 341 aaPredicted RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 TERB1Q8NA31 727 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 FAM47BQ8NA70 645 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 OR2T34Q8NGX1 318 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 OR2T3Q8NH03 318 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 GAB3Q8WWW8 586 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 PCDHAC1Q9H158 963 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 SACM1LQ9NTJ5 587 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 MBD1Q9UIS9 605 aaPredicted RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 EP400Q96L91 3159 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 TMEM233B4DJY2 109 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 CHURC1-FNTBB4DL54 471 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 MEN1O00255 615 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 CCL22O00626 93 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 NDUFS2O75306 463 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 MAGEA3P43357 314 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 ATP6V0D1P61421 351 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 DSC2Q02487 901 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 TRAP1Q12931 704 aaKnown RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 TMEM95Q3KNT9 176 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 PYHIN1Q6K0P9 492 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 CTU1Q7Z7A3 348 aaKnown RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 MAGEE2Q8TD90 523 aaPredicted RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 LRTOMTQ8WZ04 291 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 ASB9Q96DX5 294 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 INTS7Q9NVH2 962 aaKnown RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 RSL24D1Q9UHA3 163 aaKnown RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 LEF1Q9UJU2 399 aaPredicted RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 EMCNQ9ULC0 261 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 CDK5RAP2Q96SN8 1893 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 SBF2Q86WG5 1849 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 ADAMTSL1Q8N6G6 1762 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 H0Y626 953 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 ECDO95905 644 aaPredicted RBP10.3□□□□□ -0.76
LIG1-220ENST00000601091 SELLP14151 372 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 RAPSNQ13702 412 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 DSG4Q86SJ6 1040 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 SNX19Q92543 992 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 TRIM63Q969Q1 353 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 EMILIN2Q9BXX0 1053 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 SAGE1Q9NXZ1 904 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 CRLS1Q9UJA2 301 aa10.3□□□□□ -0.76
LIG1-220ENST00000601091 ZCWPW2A0A1B0GU75 182 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 HLA-DQB2P05538 268 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 ATP6V1B2P21281 511 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 GRIA2P42262 883 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 CCR10P46092 362 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 POU3F4P49335 361 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 RAC1P63000 192 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 ZNF45Q02386 682 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 LIPEQ05469 1076 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 DOC2AQ14183 400 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 CCDC142Q17RM4 750 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 RGS21Q2M5E4 152 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 TTLL9Q3SXZ7 439 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 PDE12Q6L8Q7 609 aaKnown RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 ANKFN1Q8N957 763 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 PCSK9Q8NBP7 692 aaKnown RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 BTN2A3PQ96KV6 586 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 SORT1Q99523 831 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 COQ10BQ9H8M1 238 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 SLC2A6Q9UGQ3 507 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 ABT1Q9ULW3 272 aaKnown RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 SH3PXD2BA1X283 911 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 H7C4K7 107 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 PITPNM1O00562 1244 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 TSPAN3O60637 253 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 NOS1APO75052 506 aaPredicted RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 ADAMTS4O75173 837 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 BCAS2O75934 225 aaPredicted RBP10.29□□□□□ -0.76
LIG1-220ENST00000601091 ICAM2P13598 275 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 SLC2A4P14672 509 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 GALNSP34059 522 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 TPTEP56180 551 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 SCAPQ12770 1279 aa10.29□□□□□ -0.76
LIG1-220ENST00000601091 PRKG2Q13237 762 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms