RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 VAPBO95292 243 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 POLBP06746 335 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 HOXB3P14651 431 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 CSTF2P33240 577 aaKnown RBP eCLIP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 PCBP4P57723 403 aaKnown RBP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 DR1Q01658 176 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 CFHR1Q03591 330 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 DHX34Q14147 1143 aaKnown RBP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 KRT33BQ14525 404 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 RNF187Q5TA31 235 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 RNASEH2BQ5TBB1 312 aaKnown RBP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 KIAA0930Q6ICG6 404 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 CAPRIN2Q6IMN6 1127 aaKnown RBP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 KLHL7Q8IXQ5 586 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 AGBL5Q8NDL9 886 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 MFSD3Q96ES6 412 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 PRR11Q96HE9 360 aaPredicted RBP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 TCF12Q99081 682 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 B3GNT4Q9C0J1 378 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 IMP3Q9NV31 184 aaKnown RBP16.06■□□□□ 0.16
DNMT1-229ENST00000593049 FAM8A1Q9UBU6 413 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 RAXQ9Y2V3 346 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 KIF26BQ2KJY2 2108 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 ASPMQ8IZT6 3477 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 FREM2Q5SZK8 3169 aa16.06■□□□□ 0.16
DNMT1-229ENST00000593049 USP24Q9UPU5 2620 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 ACACAQ13085 2346 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 MN1Q10571 1320 aaPredicted RBP16.05■□□□□ 0.16
DNMT1-229ENST00000593049 A0A1W2PNU3 283 aaPredicted RBP16.05■□□□□ 0.16
DNMT1-229ENST00000593049 CDRT15L2A8MXV6 281 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 GOLGA8MH3BSY2 632 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 PRMT5O14744 637 aaPredicted RBP16.05■□□□□ 0.16
DNMT1-229ENST00000593049 AVILO75366 819 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 NDUFS3O75489 264 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 ZNF658BQ4V348 819 aaPredicted RBP16.05■□□□□ 0.16
DNMT1-229ENST00000593049 TMEM164Q5U3C3 297 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 LRRC69Q6ZNQ3 347 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 CLEC14AQ86T13 490 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 OTUD6BQ8N6M0 293 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 ZNF248Q8NDW4 579 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 NAT14Q8WUY8 206 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 ZDHHC12Q96GR4 267 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 INSM2Q96T92 566 aaPredicted RBP16.05■□□□□ 0.16
DNMT1-229ENST00000593049 RAB33BQ9H082 229 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 KIR3DX1Q9H7L2 352 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 EPHA6Q9UF33 1036 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 VPS9D1Q9Y2B5 631 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 PCDHGA7Q9Y5G6 932 aa16.05■□□□□ 0.16
DNMT1-229ENST00000593049 A0A087WV48 116 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 TOX3O15405 576 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-229ENST00000593049 OR1I1O60431 355 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 PTGIRP43119 386 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 MAGEA3P43357 314 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 CAPZBP47756 277 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 C16orf72Q14CZ0 275 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 MORF4L2Q15014 288 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 PLCL1Q15111 1095 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 ANKRD20A4Q4UJ75 823 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 SYTL3Q4VX76 610 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 DNAJC21Q5F1R6 531 aaKnown RBP16.04■□□□□ 0.16
DNMT1-229ENST00000593049 IZUMO3Q5VZ72 239 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 TMEM135Q86UB9 458 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 GPR150Q8NGU9 434 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 GABPB2Q8TAK5 448 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-229ENST00000593049 ELMO1Q92556 727 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 RMDN2Q96LZ7 410 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 PANX3Q96QZ0 392 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 NAT9Q9BTE0 207 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 CARD6Q9BX69 1037 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 OR52A5Q9H2C5 316 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 MVB12BQ9H7P6 319 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 PISDQ9UG56 409 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 GNPTGQ9UJJ9 305 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 CFAP20Q9Y6A4 193 aaKnown RBP16.04■□□□□ 0.16
DNMT1-229ENST00000593049 PRSS21Q9Y6M0 314 aa16.04■□□□□ 0.16
DNMT1-229ENST00000593049 APC2O95996 2303 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 H3BMM5 538 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 KPNA5O15131 536 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 NVLO15381 856 aaKnown RBP16.03■□□□□ 0.16
DNMT1-229ENST00000593049 TLX3O43711 291 aaPredicted RBP16.03■□□□□ 0.16
DNMT1-229ENST00000593049 USP1O94782 785 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 C9P02748 559 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 ANKRD34CP0C6C1 535 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 TYRP1P17643 537 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 OGNP20774 298 aaKnown RBP16.03■□□□□ 0.16
DNMT1-229ENST00000593049 RPS3P23396 243 aaKnown RBP eCLIP16.03■□□□□ 0.16
DNMT1-229ENST00000593049 EIF2S3P41091 472 aaKnown RBP16.03■□□□□ 0.16
DNMT1-229ENST00000593049 SEMA3AQ14563 771 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 KCTD19Q17RG1 926 aaPredicted RBP16.03■□□□□ 0.16
DNMT1-229ENST00000593049 PTRHD1Q6GMV3 140 aaKnown RBP16.03■□□□□ 0.16
DNMT1-229ENST00000593049 CES3Q6UWW8 571 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 XKR5Q6UX68 686 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 SYT10Q6XYQ8 523 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 MICALCLQ6ZW33 695 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 ARHGAP22Q7Z5H3 698 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 PDZD3Q86UT5 571 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 JAMLQ86YT9 394 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 LMNTD2Q8IXW0 634 aa16.03■□□□□ 0.16
DNMT1-229ENST00000593049 LILRA3Q8N6C8 439 aaPredicted RBP16.03■□□□□ 0.16
DNMT1-229ENST00000593049 RCBTB1Q8NDN9 531 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms