RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 CACNG1Q06432 222 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 BIRC2Q13490 618 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 HIF1AQ16665 826 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 LYPLAL1Q5VWZ2 237 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 AFTPHQ6ULP2 937 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 TMEM135Q86UB9 458 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 DTX1Q86Y01 620 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 SFRP1Q8N474 314 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 NOA1Q8NC60 698 aaKnown RBP15.39■□□□□ 0.05
USB1-208ENST00000563207 DDHD1Q8NEL9 900 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 EXTL1Q92935 676 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.39■□□□□ 0.05
USB1-208ENST00000563207 TTC1Q99614 292 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 PHACTR1Q9C0D0 580 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 DPH5Q9H2P9 285 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 ATXN10Q9UBB4 475 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 TRBV5-4A0A0C4DH59 114 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 A6NCN8 305 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 TP73O15350 636 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 EIF3HO15372 352 aaKnown RBP eCLIP15.38■□□□□ 0.05
USB1-208ENST00000563207 UGT1A9O60656 530 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 SNX2O60749 519 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 MTX2O75431 263 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 USP1O94782 785 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 POLBP06746 335 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 THRAP10827 490 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 RALBP11234 206 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 ZNF8P17098 575 aaPredicted RBP15.38■□□□□ 0.05
USB1-208ENST00000563207 UGT1A6P19224 532 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 UGT1A1P22309 533 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 UGT1A4P22310 534 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 UGT1A3P35503 534 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 GPR3P46089 330 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 CRADDP78560 199 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 MRPS25P82663 173 aaKnown RBP15.38■□□□□ 0.05
USB1-208ENST00000563207 KHDC1Q4VXA5 237 aaKnown RBP15.38■□□□□ 0.05
USB1-208ENST00000563207 SNAP47Q5SQN1 464 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.38■□□□□ 0.05
USB1-208ENST00000563207 CERS6Q6ZMG9 384 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 OR4L1Q8NH43 312 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 ART4Q93070 314 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 HDAC10Q969S8 669 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 ZNF514Q96K75 400 aaPredicted RBP15.38■□□□□ 0.05
USB1-208ENST00000563207 ZNF778Q96MU6 729 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 OR2AG1Q9H205 316 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 UGT1A7Q9HAW7 530 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 UGT1A10Q9HAW8 530 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 UGT1A8Q9HAW9 530 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 PRDM8Q9NQV8 689 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 FAM114A2Q9NRY5 505 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 GRHL1Q9NZI5 618 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 SLC23A2Q9UGH3 650 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 CRLS1Q9UJA2 301 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 TMPRSS11EQ9UL52 423 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 B3GALT1Q9Y5Z6 326 aa15.38■□□□□ 0.05
USB1-208ENST00000563207 AHCTF1Q8WYP5 2266 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 CCDC162PA2VCL2 907 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 BHMG1C9JSJ3 638 aaPredicted RBP15.37■□□□□ 0.05
USB1-208ENST00000563207 NUAK1O60285 661 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 NMBRP28336 390 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 CA5AP35218 305 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 FASLGP48023 281 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 GUCY2DQ02846 1103 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 DHX9Q08211 1270 aaKnown RBP15.37■□□□□ 0.05
USB1-208ENST00000563207 TMEM115Q12893 351 aaPredicted RBP15.37■□□□□ 0.05
USB1-208ENST00000563207 GTF2H3Q13889 308 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 PLA2G4EQ3MJ16 856 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 ANKRD20A4Q4UJ75 823 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 ZRANB3Q5FWF4 1079 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 AARS2Q5JTZ9 985 aaKnown RBP15.37■□□□□ 0.05
USB1-208ENST00000563207 FNBP1LQ5T0N5 605 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 GPRC6AQ5T6X5 926 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 KIAA0930Q6ICG6 404 aaPredicted RBP15.37■□□□□ 0.05
USB1-208ENST00000563207 IYDQ6PHW0 289 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 CRTC3Q6UUV7 619 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 NXPE1Q8N323 547 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 OR4D9Q8NGE8 314 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 OR6P1Q8NGX9 317 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 GDAP1Q8TB36 358 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 TMEM159Q96B96 161 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 MFSD3Q96ES6 412 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 STAMBPL1Q96FJ0 436 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 WBP1Q96G27 269 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 TTC25Q96NG3 672 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 SLC38A3Q99624 504 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 EBNA1BP2Q99848 306 aaKnown RBP15.37■□□□□ 0.05
USB1-208ENST00000563207 CTRCQ99895 268 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 TBC1D10AQ9BXI6 508 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 SCHIP1Q9P0W5 487 aaPredicted RBP15.37■□□□□ 0.05
USB1-208ENST00000563207 PCDHGA4Q9Y5G9 962 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 MAD1L1Q9Y6D9 718 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 RPS6KL1Q9Y6S9 549 aa15.37■□□□□ 0.05
USB1-208ENST00000563207 KLHL33A6NCF5 533 aa15.36■□□□□ 0.05
USB1-208ENST00000563207 CFAP99D6REC4 459 aa15.36■□□□□ 0.05
USB1-208ENST00000563207 E7ESA3 106 aa15.36■□□□□ 0.05
USB1-208ENST00000563207 CHUKO15111 745 aa15.36■□□□□ 0.05
USB1-208ENST00000563207 GRID2O43424 1007 aa15.36■□□□□ 0.05
USB1-208ENST00000563207 CDK14O94921 469 aa15.36■□□□□ 0.05
USB1-208ENST00000563207 PGAM1P18669 254 aa15.36■□□□□ 0.05
USB1-208ENST00000563207 MSH3P20585 1137 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms