RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CENPKQ9BS16 269 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 TMEM79Q9BSE2 394 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 BBS2Q9BXC9 721 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 CPEB1Q9BZB8 566 aaKnown RBP10.26□□□□□ -0.77
CPNE1-218ENST00000439806 CD244Q9BZW8 370 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 FAM192AQ9GZU8 254 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 SEMA6AQ9H2E6 1030 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 NSUN3Q9H649 340 aaKnown RBP10.26□□□□□ -0.77
CPNE1-218ENST00000439806 RDH14Q9HBH5 336 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 LATS2Q9NRM7 1088 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 HEBP1Q9NRV9 189 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 HCFC1R1Q9NWW0 138 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 CMTM6Q9NX76 183 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 ELOVL2Q9NXB9 296 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 TRPS1Q9UHF7 1281 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 PPIL1Q9Y3C6 166 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 POLR3HQ9Y535 204 aaPredicted RBP10.26□□□□□ -0.77
CPNE1-218ENST00000439806 SNX13Q9Y5W8 968 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 SLC4A7Q9Y6M7 1214 aa10.26□□□□□ -0.77
CPNE1-218ENST00000439806 PLXNA2O75051 1894 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 ZFC3H1O60293 1989 aaKnown RBP10.25□□□□□ -0.77
CPNE1-218ENST00000439806 GRXCR2A6NFK2 248 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 K7EPI3 171 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 FXYD1O00168 92 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 NRG2O14511 850 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-218ENST00000439806 AKAP10O43572 662 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 CAPNS1P04632 268 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 MPC1LP0DKB6 136 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 PIM1P11309 404 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-218ENST00000439806 BMP1P13497 986 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 SLC6A2P23975 617 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 NFKBIAP25963 317 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 AKT1P31749 480 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 PRKG2Q13237 762 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 PHKG1Q16816 387 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 IMPG1Q17R60 797 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 AP5B1Q2VPB7 878 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 TIGD2Q4W5G0 525 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 HABP4Q5JVS0 413 aaKnown RBP10.25□□□□□ -0.77
CPNE1-218ENST00000439806 TBCELQ5QJ74 424 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 LCN8Q6JVE9 175 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 METTL2BQ6P1Q9 378 aaKnown RBP10.25□□□□□ -0.77
CPNE1-218ENST00000439806 ELMSAN1Q6PJG2 1045 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 CYP20A1Q6UW02 462 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 GDPD4Q6W3E5 623 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 DPY19L3Q6ZPD9 716 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 Q6ZSR9 355 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 ZFAND4Q86XD8 727 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 TMEM25Q86YD3 366 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 GOLM1Q8NBJ4 401 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 DNAJB14Q8TBM8 379 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 TMEM125Q96AQ2 219 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 VPS33AQ96AX1 596 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 PPWD1Q96BP3 646 aaKnown RBP10.25□□□□□ -0.77
CPNE1-218ENST00000439806 RHBDF1Q96CC6 855 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 SLC45A3Q96JT2 553 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 CNBD2Q96M20 576 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 UHRF1Q96T88 793 aaPredicted RBP10.25□□□□□ -0.77
CPNE1-218ENST00000439806 SLC52A3Q9NQ40 469 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 ACTR3BQ9P1U1 418 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 KLHL42Q9P2K6 505 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 TBC1D14Q9P2M4 693 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 GMPR2Q9P2T1 348 aaKnown RBP10.25□□□□□ -0.77
CPNE1-218ENST00000439806 B4GALT6Q9UBX8 382 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 KLQ9UEF7 1012 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 ZMYM5Q9UJ78 669 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 SUFUQ9UMX1 484 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 AURKCQ9UQB9 309 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 EIF3LQ9Y262 564 aaKnown RBP10.25□□□□□ -0.77
CPNE1-218ENST00000439806 PCDHA9Q9Y5H5 950 aa10.25□□□□□ -0.77
CPNE1-218ENST00000439806 DOCK6Q96HP0 2047 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 DHRS12A0PJE2 317 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 AGAP14A8MT82 685 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 CFAP99D6REC4 459 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 H0YJX3 145 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 EIF3FO00303 357 aaPredicted RBP10.24□□□□□ -0.77
CPNE1-218ENST00000439806 FFAR3O14843 346 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 ARPC2O15144 300 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 GPR42O15529 346 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 HNRNPRO43390 633 aaKnown RBP10.24□□□□□ -0.77
CPNE1-218ENST00000439806 TIPRLO75663 272 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 NPPAP01160 153 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 FGBP02675 491 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 C8GP07360 202 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 EBLN1P0CF75 366 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 SLC2A4P14672 509 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 EPB42P16452 691 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 POLR2EP19388 210 aaKnown RBP10.24□□□□□ -0.77
CPNE1-218ENST00000439806 XPAP23025 273 aaPredicted RBP10.24□□□□□ -0.77
CPNE1-218ENST00000439806 PSMA4P25789 261 aaKnown RBP10.24□□□□□ -0.77
CPNE1-218ENST00000439806 IL12AP29459 219 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 VIPR1P32241 457 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 CTNNB1P35222 781 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 NNMTP40261 264 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 CCR2P41597 374 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 ZFP36L2P47974 494 aaKnown RBP10.24□□□□□ -0.77
CPNE1-218ENST00000439806 GSK3BP49841 420 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 CLCN2P51788 898 aa10.24□□□□□ -0.77
CPNE1-218ENST00000439806 POLR2LP62875 67 aaKnown RBP10.24□□□□□ -0.77
CPNE1-218ENST00000439806 RPL38P63173 70 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms