RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 EGFL8Q99944 293 aa21.68■■□□□ 1.06
VSX1-205ENST00000429762 ZBTB26Q9HCK0 441 aa21.68■■□□□ 1.06
VSX1-205ENST00000429762 ARL8BQ9NVJ2 186 aa21.68■■□□□ 1.06
VSX1-205ENST00000429762 G3BP2Q9UN86 482 aaKnown RBP21.68■■□□□ 1.06
VSX1-205ENST00000429762 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.68■■□□□ 1.06
VSX1-205ENST00000429762 PRKAB1Q9Y478 270 aa21.68■■□□□ 1.06
VSX1-205ENST00000429762 ATG13O75143 517 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 PAK4O96013 591 aaPredicted RBP21.67■■□□□ 1.06
VSX1-205ENST00000429762 MAT2AP31153 395 aaKnown RBP21.67■■□□□ 1.06
VSX1-205ENST00000429762 FOXA1P55317 472 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 NCALDP61601 193 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 SYTL3Q4VX76 610 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 PLEKHS1Q5SXH7 462 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 PNCKQ6P2M8 343 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 Q6ZS52 159 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 TRMT11Q7Z4G4 463 aaKnown RBP21.67■■□□□ 1.06
VSX1-205ENST00000429762 TRAPPC5Q8IUR0 188 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 GBP7Q8N8V2 638 aaPredicted RBP21.67■■□□□ 1.06
VSX1-205ENST00000429762 KCNV2Q8TDN2 545 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 ZNF483Q8TF39 744 aaPredicted RBP21.67■■□□□ 1.06
VSX1-205ENST00000429762 SIPA1Q96FS4 1042 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 CCM2Q9BSQ5 444 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 KLHL42Q9P2K6 505 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 A0A1W2PQU0 124 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 TAPBPO15533 448 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 NUAK1O60285 661 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 SRFP11831 508 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 ZNF8P17098 575 aaPredicted RBP21.67■■□□□ 1.06
VSX1-205ENST00000429762 HSPA7P48741 367 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 ADPRHP54922 357 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 CORO7P57737 925 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 TDGQ13569 410 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 CCINQ13939 588 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 IRF4Q15306 451 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 RBBP7Q16576 425 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 UBE2R2Q712K3 238 aaPredicted RBP21.67■■□□□ 1.06
VSX1-205ENST00000429762 TREML1Q86YW5 311 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 DCBLD1Q8N8Z6 715 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 HIC2Q96JB3 615 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 TRMOQ9BU70 441 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 LGR4Q9BXB1 951 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 CA14Q9ULX7 337 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 TRAF6Q9Y4K3 522 aa21.67■■□□□ 1.06
VSX1-205ENST00000429762 PLRG1O43660 514 aaKnown RBP21.66■■□□□ 1.06
VSX1-205ENST00000429762 RNGTTO60942 597 aaKnown RBP21.66■■□□□ 1.06
VSX1-205ENST00000429762 T-ENOLP0DO92 83 aa21.66■■□□□ 1.06
VSX1-205ENST00000429762 ENO3P13929 434 aaPredicted RBP21.66■■□□□ 1.06
VSX1-205ENST00000429762 PRDX3P30048 256 aaKnown RBP21.66■■□□□ 1.06
VSX1-205ENST00000429762 BTKQ06187 659 aa21.66■■□□□ 1.06
VSX1-205ENST00000429762 NLRP8Q86W28 1048 aa21.66■■□□□ 1.06
VSX1-205ENST00000429762 CFAP61Q8NHU2 1237 aa21.66■■□□□ 1.06
VSX1-205ENST00000429762 MYOCQ99972 504 aa21.66■■□□□ 1.06
VSX1-205ENST00000429762 STN1Q9H668 368 aaKnown RBP21.66■■□□□ 1.06
VSX1-205ENST00000429762 FZD3Q9NPG1 666 aa21.66■■□□□ 1.06
VSX1-205ENST00000429762 VTI1BQ9UEU0 232 aa21.66■■□□□ 1.06
VSX1-205ENST00000429762 OR1A2Q9Y585 309 aa21.66■■□□□ 1.06
VSX1-205ENST00000429762 TCRBV21S2A2A0A5A6 115 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 E2F3O00716 465 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 LILRB5O75023 590 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 GPC4O75487 556 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 VCLP18206 1134 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 NDUFV2P19404 249 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 NCF2P19878 526 aaPredicted RBP21.65■■□□□ 1.06
VSX1-205ENST00000429762 GDF5P43026 501 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 ABRQ12979 859 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 LEXMQ3ZCV2 418 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 PDPRQ8NCN5 879 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 AGAP11Q8TF27 550 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 MARK4Q96L34 752 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 MRGPRX1Q96LB2 322 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 TMEM79Q9BSE2 394 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 HGH1Q9BTY7 390 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 TRIM39Q9HCM9 518 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 PRDM6Q9NQX0 595 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 PDE10AQ9Y233 779 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 PTGDR2Q9Y5Y4 395 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 PPP2CBP62714 309 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 PPP2CAP67775 309 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 LCP2Q13094 533 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 INPP5AQ14642 412 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 LSM12Q3MHD2 195 aaKnown RBP21.65■■□□□ 1.06
VSX1-205ENST00000429762 NXNQ6DKJ4 435 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 SYVN1Q86TM6 617 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 ASZ1Q8WWH4 475 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 TCF7L2Q9NQB0 619 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 WWOXQ9NZC7 414 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 GULP1Q9UBP9 304 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 CIDEBQ9UHD4 219 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 TMCO1Q9UM00 188 aa21.65■■□□□ 1.06
VSX1-205ENST00000429762 TBC1D3DA0A087WVF3 549 aa21.64■■□□□ 1.05
VSX1-205ENST00000429762 TBC1D3IA0A087WXS9 549 aa21.64■■□□□ 1.05
VSX1-205ENST00000429762 TBC1D3EA0A087X179 549 aa21.64■■□□□ 1.05
VSX1-205ENST00000429762 TBC1D3KA0A087X1G2 549 aa21.64■■□□□ 1.05
VSX1-205ENST00000429762 TBC1D3FA6NER0 549 aaPredicted RBP21.64■■□□□ 1.05
VSX1-205ENST00000429762 TBC1D3LB9A6J9 549 aa21.64■■□□□ 1.05
VSX1-205ENST00000429762 SLCO1B7G3V0H7 640 aa21.64■■□□□ 1.05
VSX1-205ENST00000429762 SDHDO14521 159 aa21.64■■□□□ 1.05
VSX1-205ENST00000429762 SERPINA6P08185 405 aa21.64■■□□□ 1.05
VSX1-205ENST00000429762 TBC1D3HP0C7X1 549 aa21.64■■□□□ 1.05
VSX1-205ENST00000429762 MPC1LP0DKB6 136 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms