RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NUP205Q92621 2012 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 A0A087X1B8 175 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 EEDO75530 441 aaKnown RBP12.61□□□□□ -0.39
HERC3-203ENST00000407637 TNNC2P02585 160 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 PFKMP08237 780 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 LINC00032P0C843 101 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 AZGP1P25311 298 aaKnown RBP12.61□□□□□ -0.39
HERC3-203ENST00000407637 KRT20P35900 424 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 DCTP40126 519 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 MAGEA11P43364 429 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 DSTNP60981 165 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 IL18R1Q13478 541 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 RCAN2Q14206 197 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 PGM5Q15124 567 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 TAB1Q15750 504 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 RBM20Q5T481 1227 aaKnown RBP12.61□□□□□ -0.39
HERC3-203ENST00000407637 ARHGEF16Q5VV41 709 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 MAP1SQ66K74 1059 aaPredicted RBP12.61□□□□□ -0.39
HERC3-203ENST00000407637 TMEM65Q6PI78 240 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 ZNF557Q8N988 423 aaPredicted RBP12.61□□□□□ -0.39
HERC3-203ENST00000407637 EXT2Q93063 718 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 CCDC126Q96EE4 140 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 CEP19Q96LK0 163 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 MRM3Q9HC36 420 aaKnown RBP12.61□□□□□ -0.39
HERC3-203ENST00000407637 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 POLG2Q9UHN1 485 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 ORC6Q9Y5N6 252 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 A0A0B4J293 547 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 I3L521 148 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 M0R082 166 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 DFFAO00273 331 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 KATNA1O75449 491 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 CCNYL3P0C7X3 344 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 ZNF250P15622 560 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 LBPP18428 481 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 PTPN3P26045 913 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 ETV6P41212 452 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 SLC1A2P43004 574 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 CRKP46108 304 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 RPS5P46782 204 aaKnown RBP12.61□□□□□ -0.39
HERC3-203ENST00000407637 SH3BP2P78314 561 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 EMX2Q04743 252 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 AAK1Q2M2I8 961 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 ZMAT1Q5H9K5 638 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 PLCZ1Q86YW0 608 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 GALNT11Q8NCW6 608 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 SETD6Q8TBK2 473 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 CHURC1Q8WUH1 139 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 RNF31Q96EP0 1072 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 SLC47A1Q96FL8 570 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 KCNS3Q9BQ31 491 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 ZNF304Q9HCX3 659 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 PCDHGB2Q9Y5G2 931 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 SNX8Q9Y5X2 465 aa12.61□□□□□ -0.39
HERC3-203ENST00000407637 UGT2B17O75795 530 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 OR2B3O76000 313 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 COL6A1P12109 1028 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 ZFP36L2P47974 494 aaKnown RBP12.6□□□□□ -0.39
HERC3-203ENST00000407637 GZMKP49863 264 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 UGT2B15P54855 530 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 UFM1P61960 85 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 BNC1Q01954 994 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 SLC6A3Q01959 620 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 ZNF267Q14586 743 aaPredicted RBP12.6□□□□□ -0.39
HERC3-203ENST00000407637 LAPTM4AQ15012 233 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 UGP2Q16851 508 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 GOLGA7BQ2TAP0 167 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 PTCHD3Q3KNS1 767 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 PAMR1Q6UXH9 720 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 PLEKHM3Q6ZWE6 761 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 NLRP8Q86W28 1048 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 C12orf29Q8N999 325 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 SETD9Q8NE22 299 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 FLCNQ8NFG4 579 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 KBTBD8Q8NFY9 601 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 OR10T2Q8NGX3 314 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 NPLOC4Q8TAT6 608 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 CLEC4CQ8WTT0 213 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 DACT3Q96B18 629 aaPredicted RBP12.6□□□□□ -0.39
HERC3-203ENST00000407637 PPM1MQ96MI6 270 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 SLC30A2Q9BRI3 323 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 KIFC1Q9BW19 673 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 OR51E2Q9H255 320 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 TUBB1Q9H4B7 451 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 SLC23A1Q9UHI7 598 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 LEF1Q9UJU2 399 aaPredicted RBP12.6□□□□□ -0.39
HERC3-203ENST00000407637 CFL2Q9Y281 166 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 PLD2O14939 933 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
HERC3-203ENST00000407637 PRKCBP05771 671 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 ADORA3P0DMS8 318 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 ITGAMP11215 1152 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 CYP2B6P20813 491 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 IGFBP5P24593 272 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 PPP3CCP48454 512 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 GRM1Q13255 1194 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 TRIM60Q495X7 471 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 UNC50Q53HI1 259 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 ZNF678Q5SXM1 525 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms