RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 PLEKHA1Q9HB21 404 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 PRTFDC1Q9NRG1 225 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 H0YC42 278 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 NR5A2O00482 541 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 PRICKLE3O43900 615 aaPredicted RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 ULK1O75385 1050 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 RBL1P28749 1068 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 LRRC8BQ6P9F7 803 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 LINC00696Q6ZRV3 163 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 APTXQ7Z2E3 356 aaKnown RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 TCEAL8Q8IYN2 117 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 CCDC116Q8IYX3 515 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 SH2D3CQ8N5H7 860 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 OR6N1Q8NGY5 312 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 TFGQ92734 400 aaPredicted RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 DAZLQ92904 295 aaKnown RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 OR1F2PQ96R84 312 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 MIPEPQ99797 713 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 CCNB1IP1Q9NPC3 277 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 ACSL5Q9ULC5 683 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 PCDHGA8Q9Y5G5 932 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 H3BN98 237 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 LINC01565O15544 149 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 NBNO60934 754 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 PFKLP17858 780 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 BMP7P18075 431 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 AVPR2P30518 371 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 KCNJ1P48048 391 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 KLK7P49862 253 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 ETF1P62495 437 aaKnown RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 ZNF423Q2M1K9 1284 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 ENPP6Q6UWR7 440 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 C10orf88Q9H8K7 445 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 CLEC1BQ9P126 229 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 MRPS2Q9Y399 296 aaKnown RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 A0A0A0MRY4 1105 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 CDC123O75794 336 aaPredicted RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 UGT1A5P35504 534 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 UPP1Q16831 310 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 CLHC1Q8NHS4 586 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 ETNPPLQ8TBG4 499 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 EMID1Q96A84 441 aaPredicted RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 SPATA13Q96N96 652 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 UTP23Q9BRU9 249 aaKnown RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 EXOSC4Q9NPD3 245 aaKnown RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 MOCS1Q9NZB8 636 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 WNT16Q9UBV4 365 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 A0A1B0GW55 424 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 MBTPS2O43462 519 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 PCDHGA12O60330 932 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 MTX2O75431 263 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 STATHP02808 62 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DUX4L2P0CJ85 424 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DUX4L3P0CJ86 424 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DUX4L4P0CJ87 422 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DUX4L5P0CJ88 424 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DUX4L6P0CJ89 424 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DUX4L7P0CJ90 424 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 GJA4P35212 333 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 RRP1BQ14684 758 aaKnown RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 HKDC1Q2TB90 917 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 FLYWCH1Q4VC44 716 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 TOR1AIP1Q5JTV8 583 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DNAJC14Q6Y2X3 702 aaPredicted RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 LRRC6Q86X45 466 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 EPHX4Q8IUS5 362 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 TRMT10AQ8TBZ6 339 aaKnown RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DIO2Q92813 273 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 TESCQ96BS2 214 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 ZSWIM1Q9BR11 485 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 LGR4Q9BXB1 951 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 TMEM245Q9H330 911 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 HHATLQ9HCP6 504 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DUX4Q9UBX2 424 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 ZFP69BQ9UJL9 534 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DHX15O43143 795 aaKnown RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 ERV3-1Q14264 604 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 RAB39AQ14964 217 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 MS4A13Q5J8X5 152 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 CLLU1OSQ5K130 101 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 INTS11Q5TA45 600 aaKnown RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 BTLAQ7Z6A9 289 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 ST13P4Q8IZP2 240 aaPredicted RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 DCAF4L2Q8NA75 395 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 OR4A15Q8NGL6 344 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 ATG4AQ8WYN0 398 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 CPNE1Q99829 537 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 CHMP1AQ9HD42 196 aaPredicted RBP9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 ENAMQ9NRM1 1142 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 CASZ1Q86V15 1759 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 NPIPA2E9PIF3 369 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 NPIPA3F8WFD2 350 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 OR6B1O95007 311 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 MT-CO1P00395 513 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 CALCAP01258 141 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 ALBP02768 609 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 MSL3P1P0C860 447 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 CBX5P45973 191 aa9.06□□□□□ -0.96
LIMCH1-202ENST00000381753 NFKB2Q00653 900 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms