RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 IPCEF1Q8WWN9 437 aaPredicted RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 FEM1CQ96JP0 617 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 ZNF558Q96NG5 402 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 GPATCH1Q9BRR8 931 aaKnown RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 PCDHAC1Q9H158 963 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 DPEP3Q9H4B8 488 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 TRIM39Q9HCM9 518 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 FLRT1Q9NZU1 646 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 AKAP7Q9P0M2 348 aaPredicted RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 ZNF221Q9UK13 617 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 SLC27A5Q9Y2P5 690 aa8.29□□□□□ -1.08
VPS36-201ENST00000378060 MRPS7Q9Y2R9 242 aaKnown RBP8.29□□□□□ -1.08
VPS36-201ENST00000378060 A0A1B0GVM2 712 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 TCAF2A6NFQ2 919 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 ERN1O75460 977 aaKnown RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 C22orf31O95567 290 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 FGBP02675 491 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 ASGR1P07306 291 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CDH1P12830 882 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 TCF4P15884 667 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 SPAM1P38567 509 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 HSPA7P48741 367 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 PRAMEF19Q5SWL8 479 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 AHSA2Q719I0 299 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 DEFB128Q7Z7B8 93 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 LDB1Q86U70 411 aaPredicted RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 ZC3HC1Q86WB0 502 aaKnown RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 OR10A6Q8NH74 314 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CLHC1Q8NHS4 586 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 NPLOC4Q8TAT6 608 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 LRRC15Q8TF66 581 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 PIK3R3Q92569 461 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 C1GALT1C1Q96EU7 318 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 TMEM209Q96SK2 561 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS36-201ENST00000378060 MKS1Q9NXB0 559 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 ACTR3BQ9P1U1 418 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 SLC45A1Q9Y2W3 748 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 DGKBQ9Y6T7 804 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 PTPRJQ12913 1337 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 ZNF99A8MXY4 864 aaPredicted RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 E7ENX8 843 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 INSIG1O15503 277 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 ACSL4O60488 711 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 KERAO60938 352 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 RGS20O76081 388 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 C1RP00736 705 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 IFNW1P05000 195 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CCNFP41002 786 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 ATN1P54259 1190 aaPredicted RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 MANFP55145 182 aaKnown RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 CDH4P55283 916 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 OGDHQ02218 1023 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 MPP2Q14168 576 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 GPAT3Q53EU6 434 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 KLHDC10Q6PID8 442 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 FAM131AQ6UXB0 335 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CAMKK1Q8N5S9 505 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 TTC29Q8NA56 475 aaPredicted RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 SMYD1Q8NB12 490 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 GRIN3AQ8TCU5 1115 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CD99L2Q8TCZ2 262 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 RASSF5Q8WWW0 418 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 HTRA1Q92743 480 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 GMIPQ9P107 970 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 HMGXB4Q9UGU5 601 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 LRRC37A2A6NM11 1700 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 KAT6AQ92794 2004 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CASP8AP2Q9UKL3 1982 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 MYBPHLA2RUH7 354 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 URADA6NGE7 173 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CASKO14936 926 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CHST10O43529 356 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 DLX3O60479 287 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 TNNI3P19429 210 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 GTF2E2P29084 291 aaKnown RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 GRIA1P42261 906 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 MVKQ03426 396 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 LGALS3BPQ08380 585 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 ZNHIT3Q15649 155 aaPredicted RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 FNDC3BQ53EP0 1204 aaKnown RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 MFSD4BQ5TF39 518 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 MBLAC2Q68D91 279 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 SLC39A4Q6P5W5 647 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CRYGNQ8WXF5 182 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 LRRC58Q96CX6 371 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 TMCO6Q96DC7 493 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 AARSD1Q9BTE6 412 aaKnown RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 NFKBIZQ9BYH8 718 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 MFSD1Q9H3U5 465 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 C3orf14Q9HBI5 128 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 SGK2Q9HBY8 427 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 ZBTB26Q9HCK0 441 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 ZIM2Q9NZV7 527 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CNOT6Q9ULM6 557 aaKnown RBP8.28□□□□□ -1.08
VPS36-201ENST00000378060 PER2O15055 1255 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 UGT2B17O75795 530 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 AMHP03971 560 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CFHP08603 1231 aa8.28□□□□□ -1.08
VPS36-201ENST00000378060 CCNYL3P0C7X3 344 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms