RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SLC12A4Q9UP95 1085 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 CCT8L1PA6NM43 557 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 IPO13O94829 963 aaKnown RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 SOD1P00441 154 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 LMNAP02545 664 aaKnown RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 DNTTP04053 509 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 MSH3P20585 1137 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 DGKAP23743 735 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 AKT1P31749 480 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 SERPINB5P36952 375 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 RGS4P49798 205 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 SESN3P58005 492 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 ABCE1P61221 599 aaKnown RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 TTLL9Q3SXZ7 439 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 EOGTQ5NDL2 527 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 PIWIL4Q7Z3Z4 852 aaKnown RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 TMPRSS6Q8IU80 811 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 CRLF3Q8IUI8 442 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 PHYKPLQ8IUZ5 450 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 CPNE9Q8IYJ1 553 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 LSM14AQ8ND56 463 aaKnown RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 EEF1AKMT1Q8WVE0 214 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 LINGO1Q96FE5 620 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 NAF1Q96HR8 494 aaKnown RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 ATOH8Q96SQ7 321 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 GATA5Q9BWX5 397 aaPredicted RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 TRIM55Q9BYV6 548 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 C20orf27Q9GZN8 174 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 SARS2Q9NP81 518 aaKnown RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 FAM86C1Q9NVL1 165 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 NCKIPSDQ9NZQ3 722 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 COQ6Q9Y2Z9 468 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 CFAP54Q96N23 3096 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 A0A1W2PP55 124 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 SYCE1LA8MT33 242 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 A8MT66 165 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 PLRG1O43660 514 aaKnown RBP11.87□□□□□ -0.51
USF1-203ENST00000368021 RNASEH2AO75792 299 aaKnown RBP11.87□□□□□ -0.51
USF1-203ENST00000368021 TRIM16O95361 564 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 TPBGLP0DKB5 382 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 CBSLP0DN79 551 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 CBSP35520 551 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 KCNC1P48547 511 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 KLC1Q07866 573 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 OR4D1Q15615 310 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 NAPRTQ6XQN6 538 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 ZBTB2Q8N680 514 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 LKAAEAR1Q8TD35 194 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 PPP4R1Q8TF05 950 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 DRC3Q9H069 523 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 FBXL12Q9NXK8 326 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 SERGEFQ9UGK8 458 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 PAIP2BQ9ULR5 123 aaKnown RBP11.87□□□□□ -0.51
USF1-203ENST00000368021 FZD4Q9ULV1 537 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 ARL2BPQ9Y2Y0 163 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 LRRC42Q9Y546 428 aa11.87□□□□□ -0.51
USF1-203ENST00000368021 BTN3A1O00481 513 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 KPNA5O15131 536 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 NPHS1O60500 1241 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 ATG13O75143 517 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 SKAP2O75563 359 aaPredicted RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 TM7SF2O76062 418 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 ENO3P13929 434 aaPredicted RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 MTHFD2P13995 350 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 ACADSP16219 412 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 CCR3P51677 355 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 NAGLUP54802 743 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 RCN2Q14257 317 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 IRGCQ6NXR0 463 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 USP30Q70CQ3 517 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 ADAMTSL2Q86TH1 951 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 KBTBD6Q86V97 674 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 CACUL1Q86Y37 369 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 SPNS2Q8IVW8 549 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 SMYD1Q8NB12 490 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 PIWIL2Q8TC59 973 aaKnown RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 ATOH1Q92858 354 aaPredicted RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 FUBP1Q96AE4 644 aaKnown RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 SGF29Q96ES7 293 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 HHIPQ96QV1 700 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 SORT1Q99523 831 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 SLX1AQ9BQ83 275 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 SIKE1Q9BRV8 207 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 ZCCHC2Q9C0B9 1178 aaKnown RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 DNAAF2Q9NVR5 837 aaKnown RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 CNOT6Q9ULM6 557 aaKnown RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 MMP17Q9ULZ9 603 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 ITM2AO43736 263 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 SGTAO43765 313 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 ATP5HO75947 161 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 PCDH8O95206 1070 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 FTH1P02794 183 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 AOAHP28039 575 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 TEAD1P28347 426 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 ARRB2P32121 409 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 GPR1P46091 355 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 RPS21P63220 83 aaKnown RBP11.86□□□□□ -0.51
USF1-203ENST00000368021 DMWDQ09019 674 aa11.86□□□□□ -0.51
USF1-203ENST00000368021 OVGP1Q12889 678 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms