RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SLC7A6OSQ96CW6 309 aaPredicted RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 EBPLQ9BY08 206 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 LMAN2LQ9H0V9 348 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 AMBNQ9NP70 447 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 WRAP73Q9P2S5 460 aaPredicted RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 MLXQ9UH92 298 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 LMO2P25791 158 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 CD97P48960 835 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 HSF2Q03933 536 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 RELAQ04206 551 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 C2orf80Q0P641 193 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 CAPN13Q6MZZ7 669 aaPredicted RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 RAVER1Q8IY67 606 aaKnown RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 ELMOD2Q8IZ81 293 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 FAM98AQ8NCA5 519 aaKnown RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 BCL2L14Q9BZR8 327 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 RACGAP1Q9H0H5 632 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 TMEM39AQ9NV64 488 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 NUDT4Q9NZJ9 180 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 DNAJA2O60884 412 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 FGBP02675 491 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC35G4P0C7Q5 338 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 OR1D2P34982 312 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 RBM48Q5RL73 367 aaKnown RBP16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 CRYBG2Q8N1P7 616 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 C11orf65Q8NCR3 313 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 PKP2Q99959 881 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 LPIN3Q9BQK8 851 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 IRAK3Q9Y616 596 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 NID2Q14112 1375 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ISPDA4D126 451 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ELFN1P0C7U0 828 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 SYCE2Q6PIF2 218 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 CIR1Q86X95 450 aaPredicted RBP16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 TRPV1Q8NER1 839 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC39A3Q9BRY0 314 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 CNPPD1Q9BV87 410 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 C1QTNF7Q9BXJ2 289 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 TBC1D14Q9P2M4 693 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 MANSC4A6NHS7 340 aaPredicted RBP16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 EFCAB9A8MZ26 197 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 TSPAN1O60635 241 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 IFNW1P05000 195 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 SDC2P34741 201 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 MYBPC1Q00872 1141 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 GAD2Q05329 585 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 MBTD1Q05BQ5 628 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 GCNT6Q5T4J0 391 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 OLFML2AQ68BL7 652 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF730Q6ZMV8 503 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 DAW1Q8N136 415 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF655Q8N720 491 aaPredicted RBP16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 SIDT2Q8NBJ9 832 aaKnown RBP16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 OR7D4Q8NG98 312 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 PPTC7Q8NI37 304 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 CXorf40BQ96DE9 158 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 HMCESQ96FZ2 354 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 FZD10Q9ULW2 581 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ERVK-11Q9UQG0 969 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 PRAMEF1O95521 474 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 MAPK12P53778 367 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 DNASE1L3Q13609 305 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 FAAH2Q6GMR7 532 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 CLIP4Q8N3C7 705 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ASAH2Q9NR71 780 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 OAZ3Q9UMX2 235 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 MAFBQ9Y5Q3 323 aaPredicted RBP16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 A0A0G2JPF8 293 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ABHD14A-ACY1A0A1B0GW23 586 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 AQP12BA6NM10 295 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 HNRNPCL3B7ZW38 293 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 HNRNPCL4P0DMR1 293 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 GPR153Q6NV75 609 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 CHSY3Q70JA7 882 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 AQP12AQ8IXF9 295 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF433Q8N7K0 673 aaPredicted RBP16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF516Q92618 1163 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 PCED1BQ96HM7 432 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 MYOCQ99972 504 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ELL3Q9HB65 397 aaPredicted RBP16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 CCDC177Q9NQR7 707 aaPredicted RBP16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 RABL2BQ9UNT1 228 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF780BQ9Y6R6 833 aa16.25■□□□□ 0.19
SH3RF1-201ENST00000284637 GPX6P59796 221 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 PCDH1Q08174 1060 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 SUZ12Q15022 739 aaKnown RBP16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 COLEC12Q5KU26 742 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 SVOPLQ8N434 492 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 CEP295NLQ96MC4 621 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 FERD3LQ96RJ6 166 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 MIOSQ9NXC5 875 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 ASB3Q9Y575 518 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 PCDHA2Q9Y5H9 948 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 FUOMA2VDF0 154 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 ASPAP45381 313 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC18A2Q05940 514 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 CACNG1Q06432 222 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 KCNA10Q16322 511 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 USP41Q3LFD5 358 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms