RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 AARS2Q5JTZ9 985 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 RNASEH2BQ5TBB1 312 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 CAPRIN2Q6IMN6 1127 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 IGF2-ASQ6U949 168 aa17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 NAPRTQ6XQN6 538 aa17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 SNIP1Q8TAD8 396 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 TMEM159Q96B96 161 aa17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 OR52A5Q9H2C5 316 aa17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 EPB41L1Q9H4G0 881 aa17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 THSD1Q9NS62 852 aa17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 PDP2Q9P2J9 529 aa17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 KLHL3Q9UH77 587 aa17.56■□□□□ 0.4
SNRPA1-201ENST00000254193 COL27A1Q8IZC6 1860 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 CDRT15L2A8MXV6 281 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 ITGA2BP08514 1039 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 OR56A5P0C7T3 313 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 ITGB6P18564 788 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 CASQ1P31415 396 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 ETV5P41161 510 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 ETF1P62495 437 aaKnown RBP17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 TRA2AQ13595 282 aaKnown RBP eCLIP17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 BRD3Q15059 726 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 SYT10Q6XYQ8 523 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 OTUD6BQ8N6M0 293 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 ELMO1Q92556 727 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 RSC1A1Q92681 617 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 FCRL3Q96P31 734 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 AKAP7Q9P0M2 348 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 SAMD15Q9P1V8 674 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 RNF14Q9UBS8 474 aa17.55■□□□□ 0.4
SNRPA1-201ENST00000254193 QSOX1O00391 747 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 HGSO14964 777 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 FTH1P02794 183 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 GSTM1P09488 218 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 IVDP26440 423 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 PPARGP37231 505 aaPredicted RBP17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 EIF2S3P41091 472 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 MAGEA3P43357 314 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 TTPAP49638 278 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 MAPK10P53779 464 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 GFERP55789 205 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 DR1Q01658 176 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 GSTM4Q03013 218 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 JAMLQ86YT9 394 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 PLXDC1Q8IUK5 500 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 AGGF1Q8N302 714 aaeCLIP17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 AGBL5Q8NDL9 886 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 NAF1Q96HR8 494 aaKnown RBP17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 TGM7Q96PF1 710 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 MAD1L1Q9Y6D9 718 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 FREM2Q5SZK8 3169 aa17.54■□□□□ 0.4
SNRPA1-201ENST00000254193 FAM237BA0A1B0GVD1 139 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 MAGEB16A2A368 324 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 IQCF5A8MTL0 148 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 CCDC188H7C350 402 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 DNALI1O14645 258 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 CAPN5O15484 640 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 TTI1O43156 1089 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 NDUFS3O75489 264 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 KRT37O76014 449 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 SLC5A2P31639 672 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 CSTF2P33240 577 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 MLLT3P42568 568 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 CAPZBP47756 277 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 LEPRP48357 1165 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 ARCN1P48444 511 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 RPA4Q13156 261 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 BOP1Q14137 746 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 KRT33BQ14525 404 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 PLCL1Q15111 1095 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 ANKRD20A4Q4UJ75 823 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 IZUMO3Q5VZ72 239 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 KIAA0930Q6ICG6 404 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 ZNF449Q6P9G9 518 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 C19orf48Q6RUI8 117 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 SYDE1Q6ZW31 735 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 ARHGAP22Q7Z5H3 698 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 CLEC14AQ86T13 490 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 PHC3Q8NDX5 983 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 LKAAEAR1Q8TD35 194 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 HNRNPLLQ8WVV9 542 aaKnown RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 USP7Q93009 1102 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 ZNF669Q96BR6 464 aaPredicted RBP17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 SIGLEC10Q96LC7 697 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 RUNDC3BQ96NL0 473 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 KRT12Q99456 494 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 TRIM51Q9BSJ1 452 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 IL1RAPL1Q9NZN1 696 aa17.53■□□□□ 0.4
SNRPA1-201ENST00000254193 MN1Q10571 1320 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 A0A087WV48 116 aa17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 IFRD1O00458 451 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 PRMT5O14744 637 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 LIN7AO14910 233 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 FGF3P11487 239 aaPredicted RBP17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 ITPKBP27987 946 aa17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 CSE1LP55060 971 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 PCBP4P57723 403 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 PPP1CAP62136 330 aa17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 MRPS25P82663 173 aaKnown RBP17.52■□□□□ 0.4
SNRPA1-201ENST00000254193 DHX34Q14147 1143 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms