RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 G3BP2Q9UN86 482 aaKnown RBP22.27■■□□□ 1.16
CDX1-201ENST00000231656 PIKFYVEQ9Y2I7 2098 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 ANKRD12Q6UB98 2062 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 PPP6CO00743 305 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 AGBL4Q5VU57 503 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 FAM219BQ5XKK7 198 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 TMEM92Q6UXU6 159 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 Q6ZS52 159 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 Q6ZVL8 140 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 SCUBE1Q8IWY4 988 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 ULK2Q8IYT8 1036 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 HDDC3Q8N4P3 179 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 RNPEPL1Q9HAU8 725 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 SERGEFQ9UGK8 458 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 CD84Q9UIB8 345 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 FADS3Q9Y5Q0 445 aa22.26■■□□□ 1.15
CDX1-201ENST00000231656 COPG1Q9Y678 874 aaKnown RBP22.26■■□□□ 1.15
CDX1-201ENST00000231656 PLXNA2O75051 1894 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 ETV3P41162 512 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 STARD6P59095 220 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 KPNB1Q14974 876 aaKnown RBP22.25■■□□□ 1.15
CDX1-201ENST00000231656 HERC3Q15034 1050 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 MACC1Q6ZN28 852 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 GPSM1Q86YR5 675 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 CLYBLQ8N0X4 340 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 CLDN19Q8N6F1 224 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 NAT14Q8WUY8 206 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 WDR60Q8WVS4 1066 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 CLPTM1LQ96KA5 538 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 MARK4Q96L34 752 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 RTKNQ9BST9 563 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 L3MBTL1Q9Y468 752 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 A0A088AWK7 358 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 A0A1W2PP55 124 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 RGSL1A5PLK6 1076 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 PSMD11O00231 422 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 DNTTP04053 509 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 THRAP10827 490 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 ITGAXP20702 1163 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 TMEM52BQ4KMG9 183 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 ANKS6Q68DC2 871 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.25■■□□□ 1.15
CDX1-201ENST00000231656 TECPR1Q7Z6L1 1165 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 ZNF483Q8TF39 744 aaPredicted RBP22.25■■□□□ 1.15
CDX1-201ENST00000231656 SHDQ96IW2 340 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 ZBTB26Q9HCK0 441 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 MID1IP1Q9NPA3 183 aa22.25■■□□□ 1.15
CDX1-201ENST00000231656 NKX1-2Q9UD57 310 aaPredicted RBP22.25■■□□□ 1.15
CDX1-201ENST00000231656 MRPS17Q9Y2R5 130 aaKnown RBP22.25■■□□□ 1.15
CDX1-201ENST00000231656 TAS2R38P59533 333 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 NAA20P61599 178 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 CLCQ05315 142 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 LCP2Q13094 533 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 CUL3Q13618 768 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 ACOX1Q15067 660 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 CRY1Q16526 586 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 KANK2Q63ZY3 851 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 SNX32Q86XE0 403 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 SIX5Q8N196 739 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 SYNPOQ8N3V7 929 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 ENDOVQ8N8Q3 282 aaKnown RBP22.24■■□□□ 1.15
CDX1-201ENST00000231656 RP9Q8TA86 221 aaKnown RBP22.24■■□□□ 1.15
CDX1-201ENST00000231656 TRPC4APQ8TEL6 797 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 LMAN1LQ9HAT1 526 aa22.24■■□□□ 1.15
CDX1-201ENST00000231656 TRPM6Q9BX84 2022 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 KANSL1LA0AUZ9 987 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 AZIN1O14977 448 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 AP1G1O43747 822 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 RNASEH2AO75792 299 aaKnown RBP22.23■■□□□ 1.15
CDX1-201ENST00000231656 C7P10643 843 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 ITGB6P18564 788 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 AGTR2P50052 363 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 DCDC1P59894 354 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 KHDC1Q4VXA5 237 aaKnown RBP22.23■■□□□ 1.15
CDX1-201ENST00000231656 ACSBG2Q5FVE4 666 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 NET1Q7Z628 596 aaPredicted RBP22.23■■□□□ 1.15
CDX1-201ENST00000231656 UBALD2Q8IYN6 164 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 SCAMP4Q969E2 229 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 COQ10AQ96MF6 247 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 FAM83DQ9H4H8 585 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 LTB4R2Q9NPC1 389 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 RAD18Q9NS91 495 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 FBXL12Q9NXK8 326 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 ZDHHC3Q9NYG2 299 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 NUDT4Q9NZJ9 180 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 NFKBIL1Q9UBC1 381 aaPredicted RBP22.23■■□□□ 1.15
CDX1-201ENST00000231656 SLC7A8Q9UHI5 535 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 PCTPQ9UKL6 214 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 NUMA1Q14980 2115 aa22.23■■□□□ 1.15
CDX1-201ENST00000231656 NCF1BA6NI72 391 aaPredicted RBP22.22■■□□□ 1.15
CDX1-201ENST00000231656 NCF1CA8MVU1 366 aaPredicted RBP22.22■■□□□ 1.15
CDX1-201ENST00000231656 SLC25A14O95258 325 aaPredicted RBP22.22■■□□□ 1.15
CDX1-201ENST00000231656 NCF1P14598 390 aaPredicted RBP22.22■■□□□ 1.15
CDX1-201ENST00000231656 FZD5Q13467 585 aa22.22■■□□□ 1.15
CDX1-201ENST00000231656 LRRC32Q14392 662 aa22.22■■□□□ 1.15
CDX1-201ENST00000231656 UBXN2BQ14CS0 331 aa22.22■■□□□ 1.15
CDX1-201ENST00000231656 PPP1R3AQ16821 1122 aa22.22■■□□□ 1.15
CDX1-201ENST00000231656 ATP13A5Q4VNC0 1218 aa22.22■■□□□ 1.15
CDX1-201ENST00000231656 FBXO48Q5FWF7 155 aa22.22■■□□□ 1.15
CDX1-201ENST00000231656 GPRC6AQ5T6X5 926 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms