RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 A0A0J9YYE9 177 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 ERN1O75460 977 aaKnown RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 TMEM63AO94886 807 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 USP46P62068 366 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 RPAINQ86UA6 219 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 ATP6V1C2Q8NEY4 427 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 OR52L1Q8NGH7 329 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 PYDC1Q8WXC3 89 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 DDX1Q92499 740 aaKnown RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 IGSF8Q969P0 613 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 GSDMCQ9BYG8 508 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 COL22A1Q8NFW1 1626 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 FAM72CH0Y354 149 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 LAMTOR5O43504 91 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 SPIBQ01892 262 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 HSPB3Q12988 150 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 FAM72AQ5TYM5 149 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 FAM72DQ6L9T8 149 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 FAM72BQ86X60 149 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 TRPV1Q8NER1 839 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 ZNF514Q96K75 400 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 ZNF607Q96SK3 696 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 MAP4K5Q9Y4K4 846 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 KCTD3Q9Y597 815 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 A0A0G2JN53 185 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 TTC34A8MYJ7 566 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 TFPIP10646 304 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 CORO7P57737 925 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 SUZ12Q15022 739 aaKnown RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 ZDHHC13Q8IUH4 622 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 VANGL1Q8TAA9 524 aaPredicted RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 FNDC11Q9BVV2 318 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 CD207Q9UJ71 328 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 GJD2Q9UKL4 321 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 COPG1Q9Y678 874 aaKnown RBP17.11■□□□□ 0.33
PTPN21-208ENST00000556564 DHCR24Q15392 516 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 GPR33Q49SQ1 333 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 BEND5Q7L4P6 421 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 OTUB2Q96DC9 234 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 CDKN2AIPNLQ96HQ2 116 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 TRMOQ9BU70 441 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 CNPPD1Q9BV87 410 aa17.11■□□□□ 0.33
PTPN21-208ENST00000556564 TAS2R41P59536 307 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 EIF3MQ7L2H7 374 aaKnown RBP17.1■□□□□ 0.33
PTPN21-208ENST00000556564 HHIPL1Q96JK4 782 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 PITX1P78337 314 aaPredicted RBP17.1■□□□□ 0.33
PTPN21-208ENST00000556564 TAS1R1Q7RTX1 841 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 LIX1Q8N485 282 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 BORCS6Q96GS4 357 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 NECTIN4Q96NY8 510 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 FEM1AQ9BSK4 669 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 TMLHEQ9NVH6 421 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 FNIP2Q9P278 1114 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 MBLAC1A4D2B0 266 aaPredicted RBP17.1■□□□□ 0.33
PTPN21-208ENST00000556564 MASP1P48740 699 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 C1DQ13901 141 aaKnown RBP17.1■□□□□ 0.33
PTPN21-208ENST00000556564 LPCAT2Q7L5N7 544 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 TMEM145Q8NBT3 493 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 PHC3Q8NDX5 983 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 RAB11FIP5Q9BXF6 653 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 EXD2Q9NVH0 621 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 HCFC1R1Q9NWW0 138 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 SERPINB7O75635 380 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 STC2O76061 302 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 AQP1P29972 269 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 MARCH8Q5T0T0 291 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 MACC1Q6ZN28 852 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 ADHFE1Q8IWW8 467 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 SPOCK2Q92563 424 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 PYCR2Q96C36 320 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 ALKBH4Q9NXW9 302 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 ZNF180Q9UJW8 692 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 MAP2K7O14733 419 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 RGS5O15539 181 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 POP7O75817 140 aaKnown RBP17.1■□□□□ 0.33
PTPN21-208ENST00000556564 SERPINA6P08185 405 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 ZNF30P17039 623 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 RP9Q8TA86 221 aaKnown RBP17.1■□□□□ 0.33
PTPN21-208ENST00000556564 GPR174Q9BXC1 333 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 VRTNQ9H8Y1 702 aa17.1■□□□□ 0.33
PTPN21-208ENST00000556564 WNT7BP56706 349 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 TAS2R39P59534 338 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 GALNT2Q10471 571 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 RAB33AQ14088 237 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 KPNB1Q14974 876 aaKnown RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 IL23RQ5VWK5 629 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 TRIM74Q86UV6 250 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 KLHDC7BQ96G42 594 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 APOL4Q9BPW4 351 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 LMAN2LQ9H0V9 348 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 N4BP2Q86UW6 1770 aaPredicted RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 TOGARAM1Q9Y4F4 1720 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 ITGBL1O95965 494 aaPredicted RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 UROSP10746 265 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 POLR2JP52435 117 aaKnown RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 RUNX3Q13761 415 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 PTPRCAPQ14761 206 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 OASLQ15646 514 aaKnown RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 DNASE1L2Q92874 299 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 KLHL25Q9H0H3 589 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms