RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SDHCQ99643 169 aaPredicted RBP0.63□□□□□ -2.31
COPB1-212ENST00000534771 SEMA3CQ99985 751 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 SPHK2Q9NRA0 654 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 TNFRSF19Q9NS68 423 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 C20orf141Q9NUB4 165 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 FBXL17Q9UF56 701 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 IKZF3Q9UKT9 509 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 A4GNTQ9UNA3 340 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 PPP1R3CQ9UQK1 317 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 TNNQ9UQP3 1299 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 AAR2Q9Y312 384 aaKnown RBP0.63□□□□□ -2.31
COPB1-212ENST00000534771 UMODL1Q5DID0 1318 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 FAM205AQ6ZU69 1335 aa0.63□□□□□ -2.31
COPB1-212ENST00000534771 A0A087WUV0 522 aaPredicted RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 FAM237AA0A1B0GTK4 181 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ZNF840PA6NDX5 716 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 TTC36A6NLP5 189 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 EIF4E1BA6NMX2 242 aaKnown RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 A8MXK9 166 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ATP6V0E1O15342 81 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 TSPAN3O60637 253 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 GALR3O60755 368 aaPredicted RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 ZNF354AO60765 605 aaPredicted RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 GUCY1B2O75343 617 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 SLCO2B1O94956 709 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 IPO7O95373 1038 aaKnown RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 PIGNO95427 931 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 HPP00738 406 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 IGKV3-11P04433 115 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ZNF32P17041 273 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 PRKACGP22612 351 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 PIK3CAP42336 1068 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 HALP42357 657 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 MMP15P51511 669 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 CD81P60033 236 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 HERV-K104P61576 105 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 CYCSP99999 105 aaKnown RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 CDC16Q13042 620 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 MFAP5Q13361 173 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 PDE1CQ14123 709 aaPredicted RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 TAF13Q15543 124 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 CCDC38Q502W7 563 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 EIPR1Q53HC9 387 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 RAB6CQ53S08 254 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 WDR45BQ5MNZ6 344 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 DCAF10Q5QP82 559 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ANKRD45Q5TZF3 282 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 NSUN5P2Q63ZY6 315 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 JMJD6Q6NYC1 403 aaPredicted RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 DENND5BQ6ZUT9 1274 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 Q7L0L9 218 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 RRM2BQ7LG56 351 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ATG9AQ7Z3C6 839 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ZSCAN2Q7Z7L9 614 aaPredicted RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 ZNF554Q86TJ5 538 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ZNF354CQ86Y25 554 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 FTSJ3Q8IY81 847 aaKnown RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 CCDC13Q8IYE1 715 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 PM20D2Q8IYS1 436 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 CACNA2D3Q8IZS8 1091 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 GCSAMQ8N6F7 178 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 CCDC185Q8N715 623 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 SUMF1Q8NBK3 374 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 SLC38A9Q8NBW4 561 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 OR5AP2Q8NGF4 316 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 OR4C3Q8NH37 302 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 SMPDL3BQ92485 455 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 AZIN2Q96A70 460 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 LTV1Q96GA3 475 aaPredicted RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 SERAC1Q96JX3 654 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 PPP1R13BQ96KQ4 1090 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 FAM167BQ9BTA0 163 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 PAGR1Q9BTK6 254 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 TMEM39BQ9GZU3 492 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 RAB6CQ9H0N0 254 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 MAGIXQ9H6Y5 334 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ATP13A3Q9H7F0 1226 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 HEXA-AS1Q9H8Q6 139 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 PDFQ9HBH1 243 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ACKR4Q9NPB9 350 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 OLFML3Q9NRN5 406 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 TEX10Q9NXF1 929 aaPredicted RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 HCN3Q9P1Z3 774 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 UBA2Q9UBT2 640 aaPredicted RBP0.62□□□□□ -2.31
COPB1-212ENST00000534771 HSPB7Q9UBY9 170 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 GRID1Q9ULK0 1009 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 ANGPTL3Q9Y5C1 460 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 SCINQ9Y6U3 715 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 SMCHD1A6NHR9 2005 aa0.62□□□□□ -2.31
COPB1-212ENST00000534771 A0A087WWV3 80 aa0.61□□□□□ -2.31
COPB1-212ENST00000534771 OR2M5A3KFT3 312 aa0.61□□□□□ -2.31
COPB1-212ENST00000534771 GAGE10A6NGK3 116 aa0.61□□□□□ -2.31
COPB1-212ENST00000534771 LRRC53A6NM62 1247 aa0.61□□□□□ -2.31
COPB1-212ENST00000534771 C15orf61A6NNL5 157 aa0.61□□□□□ -2.31
COPB1-212ENST00000534771 B9A039 149 aa0.61□□□□□ -2.31
COPB1-212ENST00000534771 CDX4O14627 284 aaPredicted RBP0.61□□□□□ -2.31
COPB1-212ENST00000534771 ZBTB43O43298 467 aa0.61□□□□□ -2.31
COPB1-212ENST00000534771 JRKO75564 520 aa0.61□□□□□ -2.31
COPB1-212ENST00000534771 GCNT3O95395 438 aa0.61□□□□□ -2.31
COPB1-212ENST00000534771 LY6G6DO95868 133 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms