RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 LINC00032P0C843 101 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 MAGP20916 626 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 EVI2BP34910 448 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 POLD2P49005 469 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 FAM214AQ32MH5 1076 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 BRMS1LQ5PSV4 323 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 FAM122CQ6P4D5 195 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 LEMD2Q8NC56 503 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 SLC22A17Q8WUG5 538 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 NSUN5Q96P11 429 aaKnown RBP12.2□□□□□ -0.46
USP11-206ENST00000469080 SMOC2Q9H3U7 446 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 POLR1BQ9H9Y6 1135 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 VWA7Q9Y334 891 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 DGKBQ9Y6T7 804 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 NR5A2O00482 541 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 NUAK1O60285 661 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 FKTNO75072 461 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 NIPSNAP2O75323 286 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 DEFB103AP81534 67 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 MGAT3Q09327 533 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 USP41Q3LFD5 358 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 HECTD2Q5U5R9 776 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 PTRHD1Q6GMV3 140 aaKnown RBP12.2□□□□□ -0.46
USP11-206ENST00000469080 LYSMD3Q7Z3D4 306 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 GLRX5Q86SX6 157 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 SLC22A16Q86VW1 577 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 RTP4Q96DX8 246 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 CCDC120Q96HB5 630 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 PSD2Q9BQI7 771 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 DHRS4Q9BTZ2 278 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 POLMQ9NP87 494 aaPredicted RBP12.2□□□□□ -0.46
USP11-206ENST00000469080 ADPRHL2Q9NX46 363 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 RNF11Q9Y3C5 154 aa12.2□□□□□ -0.46
USP11-206ENST00000469080 WDR90Q96KV7 1748 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 A0A087WXM4 84 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 C12orf71A8MTZ7 269 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 RGS13O14921 159 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 PER2O15055 1255 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 FGF10O15520 208 aaPredicted RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 CLASP2O75122 1294 aaKnown RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 DLGAP3O95886 979 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 MLNP12872 115 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 PBLDP30039 288 aaPredicted RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 SLC6A4P31645 630 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 HSPA13P48723 471 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 DDX39BQ13838 428 aaKnown RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 CLVS2Q5SYC1 327 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 PLPP4Q5VZY2 271 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 TTC33Q6PID6 262 aaPredicted RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 CD300LGQ6UXG3 332 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 RIC8BQ9NVN3 520 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 TOR1BO14657 336 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 COCHO43405 550 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 ZNF254O75437 659 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 SEC24AO95486 1093 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 INHBBP09529 407 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 RPL14P50914 215 aaKnown RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 PRKCQQ04759 706 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 HSPA14Q0VDF9 509 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 IKBKEQ14164 716 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 FSCBQ5H9T9 825 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 BHLHA9Q7RTU4 235 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 TMEM151BQ8IW70 566 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 FAM47BQ8NA70 645 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 METTL2AQ96IZ6 378 aaKnown RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 VAT1Q99536 393 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 TMEM246Q9BRR3 403 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 TRIM62Q9BVG3 475 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 MTG2Q9H4K7 406 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 KRT87PA6NCN2 255 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 H3BNH8 94 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 TSPAN4O14817 238 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 POLR1CO15160 346 aaPredicted RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 CD3EAPO15446 510 aaKnown RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 CCNKO75909 580 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 SLC35E2BP0CK96 405 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 CCNA2P20248 432 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 EEF1B2P24534 225 aaKnown RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 RAB41Q5JT25 222 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 TXNDC5Q8NBS9 432 aaKnown RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 TRIM63Q969Q1 353 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 NT5C3BQ969T7 300 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 PAWRQ96IZ0 340 aaKnown RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 GPR21Q99679 349 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 WASH6PQ9NQA3 447 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 MAT2BQ9NZL9 334 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 ATP6V1HQ9UI12 483 aa12.19□□□□□ -0.46
USP11-206ENST00000469080 AGO1Q9UL18 857 aaKnown RBP12.19□□□□□ -0.46
USP11-206ENST00000469080 SZT2Q5T011 3432 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 CLDN25C9JDP6 229 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 GSTM1P09488 218 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 IDUAP35475 653 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 OPRL1P41146 370 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 STK19P49842 368 aaPredicted RBP12.18□□□□□ -0.46
USP11-206ENST00000469080 TCTN1Q2MV58 587 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 SMYD5Q6GMV2 418 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 PM20D1Q6GTS8 502 aa12.18□□□□□ -0.46
USP11-206ENST00000469080 ANKS3Q6ZW76 656 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms