RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CHIT1Q13231 466 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 CGB2Q6NT52 195 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 GPR180Q86V85 440 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 NXPE1Q8N323 547 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF786Q8N393 782 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 ANKLE1Q8NAG6 615 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 OR14C36Q8NHC7 312 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 FIBINQ8TAL6 211 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 FBXO30Q8TB52 745 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 BCL7CQ8WUZ0 217 aaPredicted RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 KCNA7Q96RP8 456 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 PADI4Q9UM07 663 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 POMPQ9Y244 141 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 UPK3BL1B0FP48 263 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 UPK3BL2E5RIL1 263 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 MUSKO15146 869 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 LEFTY1O75610 366 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 CDKN1CP49918 316 aaPredicted RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 AGTR2P50052 363 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 POLR2JP52435 117 aaKnown RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 PDGFRLQ15198 375 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 TGFBIQ15582 683 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 C2orf27AQ580R0 203 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 AAGABQ6PD74 315 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 TTC33Q6PID6 262 aaPredicted RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.84□□□□□ -0.195e-6■■■■■ 29.2
SCAF4-202ENST00000399804 TCAIMQ8N3R3 496 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 VPS33AQ96AX1 596 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 TRMT2BQ96GJ1 504 aaKnown RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 CCT7Q99832 543 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 OR2AG1Q9H205 316 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 FBRSL1Q9HCM7 1045 aaKnown RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
SCAF4-202ENST00000399804 ZNFX1Q9P2E3 1918 aaKnown RBP13.84□□□□□ -0.19
SCAF4-202ENST00000399804 K7EPI3 171 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 HOXD9P28356 352 aaPredicted RBP13.83□□□□□ -0.19
SCAF4-202ENST00000399804 GDI1P31150 447 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 HOXC13P31276 330 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 SEC13P55735 322 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF678Q5SXM1 525 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 GPRC6AQ5T6X5 926 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 RRM2BQ7LG56 351 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 TMPRSS11BQ86T26 416 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 OR9I1Q8NGQ6 314 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 LPGAT1Q92604 370 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 TCEAL4Q96EI5 215 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 S100A14Q9HCY8 104 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 TREX1Q9NSU2 369 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 GIMAP4Q9NUV9 329 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 EURLQ9NYK6 297 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 GIMAP2Q9UG22 337 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 MAFFQ9ULX9 164 aa13.83□□□□□ -0.19
SCAF4-202ENST00000399804 SNNO75324 88 aaPredicted RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 DEAF1O75398 565 aaPredicted RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 CD1DP15813 335 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 GSTA3Q16772 222 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 KLK6Q92876 244 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 HOPXQ9BPY8 73 aaPredicted RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 BDH2Q9BUT1 245 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 NOL6Q9H6R4 1146 aaKnown RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 LOC285095A0A1B0GVY8 99 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 LRRC14BA6NHZ5 514 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 G3V2L1 256 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 IGLV3-25P01717 112 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 CA3P07451 260 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 CDH2P19022 906 aaPredicted RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 REP15Q6BDI9 236 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 CAPN13Q6MZZ7 669 aaPredicted RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 STK32CQ86UX6 486 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 OOSP2Q86WS3 158 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 OTUB2Q96DC9 234 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 PTCD3Q96EY7 689 aaKnown RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 NSUN5Q96P11 429 aaKnown RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 IMP3Q9NV31 184 aaKnown RBP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 ELOVL2Q9NXB9 296 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 ANAPC2Q9UJX6 822 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 WASF2Q9Y6W5 498 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 BBIP1A8MTZ0 92 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 PCCBP05166 539 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 HNRNPA1P09651 372 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCAF4-202ENST00000399804 VIPR1P32241 457 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 DNAJB13P59910 316 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 LPCAT4Q643R3 524 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 PGBD5Q8N414 524 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 OR13J1Q8NGT2 312 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 LZICQ8WZA0 190 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 TMEM79Q9BSE2 394 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 EMCNQ9ULC0 261 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 PSMD13Q9UNM6 376 aa13.83□□□□□ -0.2
SCAF4-202ENST00000399804 C8GP07360 202 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 HMGA1P17096 107 aaKnown RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 ADRA1AP35348 466 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 CCT8P50990 548 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 HMGCS1Q01581 520 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 DENND5AQ6IQ26 1287 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 RALGPS2Q86X27 583 aaPredicted RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 PQLC1Q8N2U9 271 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 WDR60Q8WVS4 1066 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms