RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 NTN4Q9HB63 628 aa17.59■□□□□ 0.41
TSPAN17-201ENST00000298564 PRDM8Q9NQV8 689 aa17.59■□□□□ 0.41
TSPAN17-201ENST00000298564 STARD7Q9NQZ5 370 aa17.59■□□□□ 0.41
TSPAN17-201ENST00000298564 POLR3BQ9NW08 1133 aaPredicted RBP17.59■□□□□ 0.41
TSPAN17-201ENST00000298564 WDR37Q9Y2I8 494 aa17.59■□□□□ 0.41
TSPAN17-201ENST00000298564 PCDHGA8Q9Y5G5 932 aa17.59■□□□□ 0.41
TSPAN17-201ENST00000298564 U3KQV3 271 aa17.59■□□□□ 0.41
TSPAN17-201ENST00000298564 SOBPA7XYQ1 873 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 NBNO60934 754 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 BCAS1O75363 584 aaPredicted RBP17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 SERPINF2P08697 491 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 FDXRP22570 491 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 JAK1P23458 1154 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 PIGAP37287 484 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 HERVK_113P63132 956 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 ADARB1P78563 741 aaKnown RBP17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 MRNIPQ6NTE8 343 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 NIPAL1Q6NVV3 410 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 LRRC8DQ7L1W4 858 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 ZFP90Q8TF47 636 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 EXOC2Q96KP1 924 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 NSMCE3Q96MG7 304 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 ERVK-6Q9BXR3 956 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 RAD21L1Q9H4I0 556 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 PSME2Q9UL46 239 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 INVSQ9Y283 1065 aa17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 ZFP37Q9Y6Q3 630 aaPredicted RBP17.58■□□□□ 0.41
TSPAN17-201ENST00000298564 TANC1Q9C0D5 1861 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 RPP40O75818 363 aaKnown RBP17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 C1RP00736 705 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 CD1DP15813 335 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 ATF6P18850 670 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 NFKBIAP25963 317 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 HTR1BP28222 390 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 GGT5P36269 586 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 ZNF773Q6PK81 442 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 HACD2Q6Y1H2 254 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 PHYKPLQ8IUZ5 450 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 CADM3Q8N126 398 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 OR4L1Q8NH43 312 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 CCDC138Q96M89 665 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 PCDHGA11Q9Y5H2 935 aa17.58■□□□□ 0.4
TSPAN17-201ENST00000298564 MOXD2PA6NHM9 499 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 SLC38A8A6NNN8 435 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 TSPAN3O60637 253 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 ZDHHC11BP0C7U3 371 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 MAGP20916 626 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 HOXD9P28356 352 aaPredicted RBP17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 RPS24P62847 133 aaKnown RBP17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 C6orf183Q5T699 404 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 GLYATQ6IB77 296 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 BLOC1S3Q6QNY0 202 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 SFRP1Q8N474 314 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 FBXO30Q8TB52 745 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 TRUB1Q8WWH5 349 aaKnown RBP17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 SMIM14Q96QK8 99 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 ALOXE3Q9BYJ1 711 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 NACA2Q9H009 215 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 TOR3AQ9H497 397 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 CATSPERZQ9NTU4 200 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 IKZF3Q9UKT9 509 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 CPQQ9Y646 472 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 KDM1AO60341 852 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 CLASP2O75122 1294 aaKnown RBP17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 EPOP01588 193 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 LBPP18428 481 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 TGFBR1P36897 503 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 SLC26A3P40879 764 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 RGRP47804 291 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 KCNK10P57789 538 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 GALNT1Q10472 559 aaPredicted RBP17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 GPNMBQ14956 572 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 UGT3A1Q6NUS8 523 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 SPARTQ8N0X7 666 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 L3HYPDHQ96EM0 354 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 CD320Q9NPF0 282 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 PCDHB3Q9Y5E6 796 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 MKI67P46013 3256 aaKnown RBP17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 SUPT3HB4E1H0 165 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 ADAM12O43184 909 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 TBC1D4O60343 1298 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 OXSR1O95747 527 aaPredicted RBP17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 HTR1AP08908 422 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 IL12AP29459 219 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 HPCAL1P37235 193 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 ARSFP54793 590 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 CLCQ05315 142 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 BNIP2Q12982 314 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 LAPTM4AQ15012 233 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 DPY19L1Q2PZI1 675 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 BROXQ5VW32 411 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 TMEM236Q5W0B7 351 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 SH3YL1Q96HL8 342 aaPredicted RBP17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 CDKN2AIPNLQ96HQ2 116 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 ALPK1Q96QP1 1244 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 CARS2Q9HA77 564 aaKnown RBP17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 GNPTGQ9UJJ9 305 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 SPO11Q9Y5K1 396 aa17.57■□□□□ 0.4
TSPAN17-201ENST00000298564 UBA6A0AVT1 1052 aaPredicted RBP17.56■□□□□ 0.4
TSPAN17-201ENST00000298564 CCDC154A6NI56 674 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms