RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 MYLKQ15746 1914 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 A0A1B0GTL3 188 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 EIF3FO00303 357 aaPredicted RBP17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 AREL1O15033 823 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 IDH3BO43837 385 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 PRR35P0CG20 571 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 RYKP34925 604 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 CAP1Q01518 475 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 GRIK2Q13002 908 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 LAPTM5Q13571 262 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 SYT6Q5T7P8 510 aaPredicted RBP17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 RSBN1Q5VWQ0 802 aaPredicted RBP17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 RAB44Q7Z6P3 723 aaPredicted RBP17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 ABI1Q8IZP0 508 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 OR52K2Q8NGK3 314 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 MCFD2Q8NI22 146 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 PRKD2Q9BZL6 878 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 MARCH7Q9H992 704 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 ANKHQ9HCJ1 492 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 TBC1D14Q9P2M4 693 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 DKK3Q9UBP4 350 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 NUP205Q92621 2012 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 RAD51BO15315 384 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 SEPT4O43236 478 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 GPR32O75388 356 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 PMPCBO75439 489 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 KATNA1O75449 491 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 BEST1O76090 585 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 CST1P01037 141 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 CHRNB1P11230 501 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 PSMB9P28065 219 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 IL12AP29459 219 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 CA8P35219 290 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 TGFBR1P36897 503 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 GEMP55040 296 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 NKG7Q16617 165 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 COLEC12Q5KU26 742 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 VARS2Q5ST30 1063 aaKnown RBP17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 TXNDC11Q6PKC3 985 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 SPESP1Q6UW49 350 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 PRR23BQ6ZRT6 265 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 PLD3Q8IV08 490 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 SVOPLQ8N434 492 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 FBLIM1Q8WUP2 373 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 RPL3LQ92901 407 aaKnown RBP17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 ENTPD7Q9NQZ7 604 aa17.46■□□□□ 0.39
CDKN1B-201ENST00000228872 SAGE2PA6NJ88 616 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 HS6ST1O60243 411 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 ANGPTL1O95841 491 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 BMP1P13497 986 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 GGT1P19440 569 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 SLC26A3P40879 764 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 MASP1P48740 699 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 DGCR6Q14129 220 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 CLCA4Q14CN2 919 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 PFKFB4Q16877 469 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 NOMO2Q5JPE7 1267 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 ENPP6Q6UWR7 440 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 RYBPQ8N488 228 aaPredicted RBP17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 ATL1Q8WXF7 558 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 OR2B2Q9GZK3 357 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 RNF38Q9H0F5 515 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 PNMA8BQ9ULN7 279 aaPredicted RBP17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 EIF3LQ9Y262 564 aaKnown RBP17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 THSD7BQ9C0I4 1608 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 CLDN5O00501 218 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 PRMT5O14744 637 aaPredicted RBP17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 PTTG1O95997 202 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 CD1DP15813 335 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 TRPC1P48995 793 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 MTPNP58546 118 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 PCBP1Q15365 356 aaKnown RBP eCLIP17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 NPTX1Q15818 432 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 CCDC81Q6ZN84 652 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 LDB1Q86U70 411 aaPredicted RBP17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 FAM83FQ8NEG4 500 aaPredicted RBP17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 FRS2Q8WU20 508 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 LGALS12Q96DT0 336 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 REXO5Q96IC2 774 aaKnown RBP17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 FSD1LQ9BXM9 530 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 DUSP16Q9BY84 665 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 BRINP2Q9C0B6 783 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 SMPD4Q9NXE4 827 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 IL37Q9NZH6 218 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 C3orf18Q9UK00 162 aa17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 PDCD11Q14690 1871 aaKnown RBP17.45■□□□□ 0.38
CDKN1B-201ENST00000228872 C17orf102A2RUQ5 167 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 MYADML2A6NDP7 307 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 TAF4O00268 1085 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 DFFAO00273 331 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 IL5RAQ01344 420 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 CACNB2Q08289 660 aaPredicted RBP17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 KIAA0319Q5VV43 1072 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 UBE2UQ5VVX9 321 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 TUBA3EQ6PEY2 450 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 FBXO30Q8TB52 745 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 PPM1MQ96MI6 270 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 UGT2B28Q9BY64 529 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
CDKN1B-201ENST00000228872 OPTCQ9UBM4 332 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms