RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 MEIOBQ8N635 442 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 CPSF7Q8N684 471 aaKnown RBP10.97□□□□□ -0.65
KNOP1-201ENST00000219837 LRMDAQ9H2I8 198 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 FAM83DQ9H4H8 585 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 CPSF4LA6NMK7 179 aaKnown RBP10.97□□□□□ -0.65
KNOP1-201ENST00000219837 NDST3O95803 873 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 ZNF823P16415 610 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 NMBRP28336 390 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 NDST2P52849 883 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 PUM1Q14671 1186 aaKnown RBP eCLIP10.97□□□□□ -0.653e-8■■□□□ 13.5
KNOP1-201ENST00000219837 NOMO1Q15155 1222 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 UBAP2Q5T6F2 1119 aaKnown RBP10.97□□□□□ -0.65
KNOP1-201ENST00000219837 DGAT2Q96PD7 388 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 CPXM1Q96SM3 734 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 DNAJC5Q9H3Z4 198 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 CLK4Q9HAZ1 481 aaKnown RBP10.97□□□□□ -0.65
KNOP1-201ENST00000219837 TCAF1Q9Y4C2 921 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 AREL1O15033 823 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 NRP2O60462 931 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 CYB5AP00167 134 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 SYN1P17600 705 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 CPN2P22792 545 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 MSX2P35548 267 aaPredicted RBP10.97□□□□□ -0.65
KNOP1-201ENST00000219837 ALDH3A2P51648 485 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 PRR5P85299 388 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 TAF1AQ15573 450 aaPredicted RBP10.97□□□□□ -0.65
KNOP1-201ENST00000219837 TIGD2Q4W5G0 525 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 GLYATQ6IB77 296 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 GDF6Q6KF10 455 aaPredicted RBP10.97□□□□□ -0.65
KNOP1-201ENST00000219837 BBS12Q6ZW61 710 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 COX18Q8N8Q8 333 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 RASGEF1AQ8N9B8 481 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 KCT2Q8NC54 265 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 KAT2AQ92830 837 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 SLC35G5Q96KT7 338 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 RHOJQ9H4E5 214 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 MGAT4AQ9UM21 535 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 PCDHB11Q9Y5F2 797 aa10.97□□□□□ -0.65
KNOP1-201ENST00000219837 MYO5BQ9ULV0 1848 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 TPSB2P20231 275 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 OGNP20774 298 aaKnown RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 NRG3P56975 720 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 TAS2R50P59544 299 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 ZNF460Q14592 562 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 TPSAB1Q15661 275 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 C5orf22Q49AR2 442 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 TMEM63BQ5T3F8 832 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 SLC9A9Q8IVB4 645 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 GTPBP3Q969Y2 492 aaKnown RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 PCBD2Q9H0N5 130 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 C5orf60A6NFR6 353 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 WRBO00258 174 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 CCL22O00626 93 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 PRMT5O14744 637 aaPredicted RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 KLRC4O43908 158 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 C8GP07360 202 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 ZNF8P17098 575 aaPredicted RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 AGXTP21549 392 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 GRK6P43250 576 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 SEMG2Q02383 582 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 EVX2Q03828 476 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 SP140Q13342 867 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 ARHGAP22Q7Z5H3 698 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 CYB5D2Q8WUJ1 264 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 TRIM39Q9HCM9 518 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 CHRAC1Q9NRG0 131 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 GNEQ9Y223 722 aaKnown RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 NR2E1Q9Y466 385 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 PCDHGC4Q9Y5F7 938 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 FADS2P1A8MWK0 482 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 B4GALT4O60513 344 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 DUSP11O75319 330 aaKnown RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 CCNB2O95067 398 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 PGM3O95394 542 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 NR2F6P10588 404 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 HSDL1Q3SXM5 330 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 VPS26BQ4G0F5 336 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 RFTN2Q52LD8 501 aaPredicted RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 GPR65Q8IYL9 337 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 SLC22A15Q8IZD6 547 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 GRHL3Q8TE85 626 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 RBM4BQ9BQ04 359 aaKnown RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 RBM4Q9BWF3 364 aaKnown RBP10.96□□□□□ -0.65
KNOP1-201ENST00000219837 GSDMCQ9BYG8 508 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 OR2AG1Q9H205 316 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 LDAHQ9H6V9 325 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 RAB21Q9UL25 225 aa10.96□□□□□ -0.65
KNOP1-201ENST00000219837 PDPK1O15530 556 aa10.96□□□□□ -0.66
KNOP1-201ENST00000219837 TGDSO95455 350 aa10.96□□□□□ -0.66
KNOP1-201ENST00000219837 LDOC1O95751 146 aaPredicted RBP10.96□□□□□ -0.66
KNOP1-201ENST00000219837 ALPPP05187 535 aa10.96□□□□□ -0.66
KNOP1-201ENST00000219837 C8AP07357 584 aa10.96□□□□□ -0.66
KNOP1-201ENST00000219837 BPGMP07738 259 aa10.96□□□□□ -0.66
KNOP1-201ENST00000219837 ITGB5P18084 799 aa10.96□□□□□ -0.66
KNOP1-201ENST00000219837 ALDH4A1P30038 563 aa10.96□□□□□ -0.66
KNOP1-201ENST00000219837 HOXA10P31260 410 aaPredicted RBP10.96□□□□□ -0.66
KNOP1-201ENST00000219837 CLCQ05315 142 aa10.96□□□□□ -0.66
KNOP1-201ENST00000219837 LCLAT1Q6UWP7 414 aa10.96□□□□□ -0.66
KNOP1-201ENST00000219837 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms