RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 LINGO4Q6UY18 593 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 SPATC1Q76KD6 591 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 RASGEF1CQ8N431 466 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 EPYCQ99645 322 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 PCDHGC5Q9Y5F6 944 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 COMMD4Q9H0A8 199 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 GDAP2Q9NXN4 497 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 DNPEPQ9ULA0 475 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 FARSAQ9Y285 508 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 TECPR2O15040 1411 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 CMPK1P30085 196 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 C2orf80Q0P641 193 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 ANKRD26P1Q6NSI1 321 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 SYVN1Q86TM6 617 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 TEX19Q8NA77 164 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 PHC3Q8NDX5 983 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 OR2L2Q8NH16 312 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 P2RX7Q99572 595 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 SEMA3CQ99985 751 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 SPATA31A5Q5VU36 1347 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 SPATA31A7Q8IWB4 1347 aa16.19■□□□□ 0.18
CACNA1A-258ENST00000638029 PRLRP16471 622 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 TTPAP49638 278 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 MAD2L1BPQ15013 274 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 ATXN7L2Q5T6C5 722 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 KCTD4Q8WVF5 259 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 MEAF6Q9HAF1 191 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 PHPT1Q9NRX4 125 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 ANXA2P2A6NMY6 339 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 ANXA2P07355 339 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 RAB4AP20338 218 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 CDK7P50613 346 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 FOXK1P85037 733 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 SLCO6A1Q86UG4 719 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 RALGPS2Q86X27 583 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 IL22RA1Q8N6P7 574 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 GALNT6Q8NCL4 622 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 TRPV1Q8NER1 839 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 TBC1D15Q8TC07 691 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 COPS5Q92905 334 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 EBPLQ9BY08 206 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 MED28Q9H204 178 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 SRMSQ9H3Y6 488 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 SNX7Q9UNH6 387 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 AP3M1Q9Y2T2 418 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 AURKAO14965 403 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 SMIM10L2AP0DMW4 78 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 SMIM10L2BP0DMW5 78 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 CTSKP43235 329 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 ARCN1P48444 511 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 XIAPP98170 497 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 LARS2Q15031 903 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 TYSND1Q2T9J0 566 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 SH3PXD2AQ5TCZ1 1133 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 FIP1L1Q6UN15 594 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 KYAT3Q6YP21 454 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 VCPIP1Q96JH7 1222 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 ZNF649Q9BS31 505 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 TMEM27Q9HBJ8 222 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 LAMP2P13473 410 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 PTNP21246 168 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 CD47Q08722 323 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 IDNKQ5T6J7 187 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 STAG3L4Q8TBR4 150 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 LCN9Q8WX39 176 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 GTPBP3Q969Y2 492 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 CTPS2Q9NRF8 586 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 CENPMQ9NSP4 180 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 FAM240BA0A1B0GVZ2 78 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 MSCO60682 206 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 PGLSO95336 258 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 ITGA2P17301 1181 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 MIPP30301 263 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 PAPD7Q5XG87 772 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 TNS4Q8IZW8 715 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 KLRF1Q9NZS2 232 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 ADGRE2Q9UHX3 823 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 HCN2Q9UL51 889 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 APOL3O95236 402 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 ZSCAN5DPP0CG00 497 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 ZNF20P17024 532 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 TMEM11P17152 192 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 AZGP1P25311 298 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 MTHFRP42898 656 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 NKAPLQ5M9Q1 402 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 PIK3C2BO00750 1634 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 PNPLA6Q8IY17 1366 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 CAPN14A8MX76 684 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 GRM6O15303 877 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 CLPXO76031 633 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 CBLP22681 906 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 OR3A3P47888 321 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 OR3A2P47893 321 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 MTX3Q5HYI7 312 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 IQCHQ86VS3 1027 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 PSTKQ8IV42 348 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 PTGR2Q8N8N7 351 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 GRHL3Q8TE85 626 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 STK32AQ8WU08 396 aa16.18■□□□□ 0.18
CACNA1A-258ENST00000638029 HNRNPLLQ8WVV9 542 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms