RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 SP110Q9HB58 689 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 SEMA4BQ9NPR2 832 aaPredicted RBP11.35□□□□□ -0.59
DDB1-224ENST00000545894 UXTQ9UBK9 157 aaPredicted RBP11.35□□□□□ -0.59
DDB1-224ENST00000545894 GNPTGQ9UJJ9 305 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 SLC30A1Q9Y6M5 507 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 CEP290O15078 2479 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 A0A1B0GTL3 188 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 FUOMA2VDF0 154 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 KERAO60938 352 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 SLC22A3O75751 556 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 ATXN1LP0C7T5 689 aaKnown RBP11.35□□□□□ -0.59
DDB1-224ENST00000545894 HRH2P25021 359 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 CASP2P42575 452 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 ZFP36L2P47974 494 aaKnown RBP11.35□□□□□ -0.59
DDB1-224ENST00000545894 RELAQ04206 551 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 TUBA3CQ13748 450 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 FXNQ16595 210 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 PDCD4Q53EL6 469 aaKnown RBP11.35□□□□□ -0.59
DDB1-224ENST00000545894 BROXQ5VW32 411 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 PPP2R2DQ66LE6 453 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 ANKS6Q68DC2 871 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 GRAMD4Q6IC98 578 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 ZC3H7AQ8IWR0 971 aaKnown RBP11.35□□□□□ -0.59
DDB1-224ENST00000545894 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 PDPRQ8NCN5 879 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 STAG3L4Q8TBR4 150 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 BPIFB1Q8TDL5 484 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 TIFAQ96CG3 184 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 NRBF2Q96F24 287 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 RNF145Q96MT1 663 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 TMEM74Q96NL1 305 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 MUS81Q96NY9 551 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 NUSAP1Q9BXS6 441 aaKnown RBP11.35□□□□□ -0.59
DDB1-224ENST00000545894 FANCEQ9HB96 536 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 PAIP2BQ9ULR5 123 aaKnown RBP11.35□□□□□ -0.59
DDB1-224ENST00000545894 RWDD3Q9Y3V2 267 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 TIMM22Q9Y584 194 aa11.35□□□□□ -0.59
DDB1-224ENST00000545894 LOC285095A0A1B0GVY8 99 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 C5orf67F2Z3F1 127 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 M0QZQ0 153 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 SEC14L2O76054 403 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 ESRRBO95718 433 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 BCL10O95999 233 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 C1RP00736 705 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 CDH1P12830 882 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 ELK4P28324 431 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 PGFP49763 221 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 POLR2JP52435 117 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 UFM1P61960 85 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 ECT2LQ008S8 904 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 OTUD3Q5T2D3 398 aaPredicted RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 FAM171A1Q5VUB5 890 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 EFL1Q7Z2Z2 1120 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 TFAP2DQ7Z6R9 452 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 DDX53Q86TM3 631 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 CHPT1Q8WUD6 406 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 TRUB1Q8WWH5 349 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 PEX13Q92968 403 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 KIAA1191Q96A73 305 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 TADA1Q96BN2 335 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 B3GALT6Q96L58 329 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 C1orf74Q96LT6 269 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 ZNF599Q96NL3 588 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 PKMYT1Q99640 499 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 AARSD1Q9BTE6 412 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 BRINP2Q9C0B6 783 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 ING2Q9H160 280 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 NANOGQ9H9S0 305 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 SLC28A3Q9HAS3 691 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 SYTL2Q9HCH5 934 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 SUN2Q9UH99 717 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 NUDT5Q9UKK9 219 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 RNF112Q9ULX5 631 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 PCDHGA11Q9Y5H2 935 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 V9GYQ6 96 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 LAMA3Q16787 3333 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 CCDC162PA2VCL2 907 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 CARNS1A5YM72 827 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 SOBPA7XYQ1 873 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 H0Y858 1186 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 RPP40O75818 363 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 CHEK2O96017 543 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 NPPAP01160 153 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 RPS17P08708 135 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 ENO2P09104 434 aaPredicted RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 HAPLN1P10915 354 aaPredicted RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 OGNP20774 298 aaKnown RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 PAX3P23760 479 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 PPM1AP35813 382 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 ALDH3A2P51648 485 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 CCR3P51677 355 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 MAPK10P53779 464 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 ARSFP54793 590 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 EMX2Q04743 252 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 SEMA3AQ14563 771 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 CBX2Q14781 532 aaPredicted RBP11.34□□□□□ -0.59
DDB1-224ENST00000545894 CRY1Q16526 586 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 TIGD2Q4W5G0 525 aa11.34□□□□□ -0.59
DDB1-224ENST00000545894 PYCR3Q53H96 274 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms