RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 XRCC1P18887 633 aaPredicted RBP11.65□□□□□ -0.54
GABPB1-206ENST00000543881 HMGCLP35914 325 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 DLSTP36957 453 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 GFERP55789 205 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 ERV3-1Q14264 604 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 SLC1A5Q15758 541 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 SEPT7Q16181 437 aaKnown RBP11.65□□□□□ -0.54
GABPB1-206ENST00000543881 CCDC70Q6NSX1 233 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 PID1Q7Z2X4 250 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 RCOR2Q8IZ40 523 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 QKIQ96PU8 341 aaKnown RBP eCLIP11.65□□□□□ -0.543e-6■■■■□ 21.4
GABPB1-206ENST00000543881 FCRL5Q96RD9 977 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 GORASP1Q9BQQ3 440 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 TIMM29Q9BSF4 260 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.65□□□□□ -0.54
GABPB1-206ENST00000543881 TRIM5Q9C035 493 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 IL17CQ9P0M4 197 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 KLHL8Q9P2G9 620 aaPredicted RBP11.65□□□□□ -0.54
GABPB1-206ENST00000543881 KLHL3Q9UH77 587 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 TLK1Q9UKI8 766 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 POLHQ9Y253 713 aa11.65□□□□□ -0.54
GABPB1-206ENST00000543881 MN1Q10571 1320 aaPredicted RBP11.65□□□□□ -0.55
GABPB1-206ENST00000543881 A1L4Q6 167 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 GAPDHSO14556 408 aaPredicted RBP11.64□□□□□ -0.55
GABPB1-206ENST00000543881 BUD23O43709 281 aaKnown RBP11.64□□□□□ -0.55
GABPB1-206ENST00000543881 UGT1A9O60656 530 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 SEMA7AO75326 666 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 RNF224P0DH78 156 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 TYRP1P17643 537 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 UGT1A6P19224 532 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 UGT1A1P22309 533 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 UGT1A4P22310 534 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 RPL10P27635 214 aaKnown RBP11.64□□□□□ -0.55
GABPB1-206ENST00000543881 DRG2P55039 364 aaKnown RBP11.64□□□□□ -0.55
GABPB1-206ENST00000543881 TMEM115Q12893 351 aaPredicted RBP11.64□□□□□ -0.55
GABPB1-206ENST00000543881 PTPRCAPQ14761 206 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 CHRNA6Q15825 494 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 C11orf63Q6NUN7 778 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 ABRAXAS1Q6UWZ7 409 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 TMEM26Q6ZUK4 368 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 BBS12Q6ZW61 710 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 CCDC50Q8IVM0 306 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 IPMKQ8NFU5 416 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 CPT1CQ8TCG5 803 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 RNF31Q96EP0 1072 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 SRPK1Q96SB4 655 aaKnown RBP11.64□□□□□ -0.55
GABPB1-206ENST00000543881 ULBP3Q9BZM4 244 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 TRABDQ9H4I3 376 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 UCK1Q9HA47 277 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 UGT1A7Q9HAW7 530 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 UGT1A10Q9HAW8 530 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 UGT1A8Q9HAW9 530 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 SIDT1Q9NXL6 827 aaKnown RBP11.64□□□□□ -0.55
GABPB1-206ENST00000543881 TRIM10Q9UDY6 481 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 CROTQ9UKG9 612 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 WDR37Q9Y2I8 494 aa11.64□□□□□ -0.55
GABPB1-206ENST00000543881 RP1L1Q8IWN7 2480 aaPredicted RBP11.64□□□□□ -0.55
GABPB1-206ENST00000543881 TNRC6AQ8NDV7 1962 aaKnown RBP11.64□□□□□ -0.55
GABPB1-206ENST00000543881 OR52A4PA6NMU1 304 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 PDZK1P1A8MUH7 402 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 KATNA1O75449 491 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 C9P02748 559 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 PDGFAP04085 211 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 RBL1P28749 1068 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 PMS2P54278 862 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 PPP2R5EQ16537 467 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 C6orf15Q6UXA7 325 aaPredicted RBP11.63□□□□□ -0.55
GABPB1-206ENST00000543881 TMEM135Q86UB9 458 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 CCDC170Q8IYT3 715 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 RASGEF1AQ8N9B8 481 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 BLOC1S5Q8TDH9 187 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 C9orf72Q96LT7 481 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 VAT1Q99536 393 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 EPB41L1Q9H4G0 881 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 SLC40A1Q9NP59 571 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 CUEDC1Q9NWM3 386 aaPredicted RBP11.63□□□□□ -0.55
GABPB1-206ENST00000543881 DUSP10Q9Y6W6 482 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 ESPL1Q14674 2120 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 ITPR2Q14571 2701 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 CDC14CA4D256 554 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 SOWAHDA6NJG2 315 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 HACD1B0YJ81 288 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 APOC4-APOC2K7ER74 178 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 UBXN7O94888 489 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 AGTP01019 485 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 VIPP01282 170 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 APOC2P02655 101 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 ZNF28P17035 718 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 SPAM1P38567 509 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 LEPRP48357 1165 aaKnown RBP11.63□□□□□ -0.55
GABPB1-206ENST00000543881 CTSCP53634 463 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 FOXM1Q08050 763 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 MPP3Q13368 585 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 OLIG2Q13516 323 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 GPR18Q14330 331 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 AGAP9Q5VTM2 703 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 FAM151BQ6UXP7 276 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 WASH2PQ6VEQ5 465 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 GLT6D1Q7Z4J2 308 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms