RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	ANKRD22	Q5VYY1	191 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	LRRC8B	Q6P9F7	803 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	AFTPH	Q6ULP2	937 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	NAPRT	Q6XQN6	538 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	RAB11FIP2	Q7L804	512 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	TMPRSS9	Q7Z410	1059 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	LDB1	Q86U70	411 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	C17orf82	Q86X59	251 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	PIANP	Q8IYJ0	282 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	OR4L1	Q8NH43	312 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	ZNF514	Q96K75	400 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	C12orf66	Q96MD2	445 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	NRSN2	Q9GZP1	204 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	WWP1	Q9H0M0	922 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	SMOX	Q9NWM0	555 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	SYBU	Q9NX95	663 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	AKAP7	Q9P0M2	348 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	PISD	Q9UG56	409 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	CACNA1G	O43497	2377 aa		10.85	□□□□□ -0.67
DDB1-222	ENST00000543627	BPTF	Q12830	3046 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	UNC13C	Q8NB66	2214 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	IGHV1OR21-1	A0A087WYE8	117 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	CCDC187	A0A096LP49	1063 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	TMEM8B	A6NDV4	472 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	MGAT4D	A6NG13	374 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	GOLGA8K	D6RF30	607 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	GOLGA8T	H3BQL2	631 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	TMX2-CTNND1	H3BSU7	103 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	AP3B1	O00203	1094 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	TAF4	O00268	1085 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	CES2	O00748	559 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	DUX1	O43812	170 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	SLC35G4	P0C7Q5	338 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	BRAF	P15056	766 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	TPSB2	P20231	275 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	NMBR	P28336	390 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	GPR3	P46089	330 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	PLCL1	Q15111	1095 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	TPSAB1	Q15661	275 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	CYP1B1	Q16678	543 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	DUS1L	Q6P1R4	473 aa	Known RBP	10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	ZNF449	Q6P9G9	518 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	C19orf48	Q6RUI8	117 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	SYT10	Q6XYQ8	523 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	NLRP9	Q7RTR0	991 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	C11orf96	Q7Z7L8	435 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	KDF1	Q8NAX2	398 aa	Predicted RBP	10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	OR13J1	Q8NGT2	312 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	WDR36	Q8NI36	951 aa	Known RBP	10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	HEXDC	Q8WVB3	486 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	CPT1B	Q92523	772 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	PRR11	Q96HE9	360 aa	Predicted RBP	10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	CCDC74B	Q96LY2	380 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	RANBP9	Q96S59	729 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	CCM2	Q9BSQ5	444 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	IL22	Q9GZX6	179 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	POLR1B	Q9H9Y6	1135 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	SARS2	Q9NP81	518 aa	Known RBP	10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	EIF2B3	Q9NR50	452 aa	Known RBP	10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	TMEM9	Q9P0T7	183 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	SAMD15	Q9P1V8	674 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	LOXL2	Q9Y4K0	774 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	MAD1L1	Q9Y6D9	718 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	PRSS21	Q9Y6M0	314 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	CHD8	Q9HCK8	2581 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	CEP295	Q9C0D2	2601 aa		10.84	□□□□□ -0.67
DDB1-222	ENST00000543627	ASPM	Q8IZT6	3477 aa		10.83	□□□□□ -0.67
DDB1-222	ENST00000543627	TPR	P12270	2363 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	ZFC3H1	O60293	1989 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627		A6NCN8	305 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	SRRM3	A6NNA2	597 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627		H7C0S8	307 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	CD3EAP	O15446	510 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	OR1I1	O60431	355 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	KCNJ13	O60928	360 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	VAPB	O95292	243 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	XRCC1	P18887	633 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	ITIH1	P19827	911 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	FOXN2	P32314	431 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	PPARG	P37231	505 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	FASLG	P48023	281 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	FNTA	P49354	379 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	MRPS25	P82663	173 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	KCNJ11	Q14654	390 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	RTP5	Q14D33	572 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	RPE65	Q16518	533 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	LYPLAL1	Q5VWZ2	237 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	PAPD7	Q5XG87	772 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	METRNL	Q641Q3	311 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	ABRAXAS1	Q6UWZ7	409 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	LRRC69	Q6ZNQ3	347 aa		10.83	□□□□□ -0.68
DDB1-222	ENST00000543627	TMEM26	Q6ZUK4	368 aa		10.83	□□□□□ -0.68

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