RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 KRT5P13647 590 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 HPGDP15428 266 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 NPPBP16860 134 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 CDH3P22223 829 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 GPD2P43304 727 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 IFNAR2P48551 515 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 BCAP31P51572 246 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ARHGDIBP52566 201 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 IST1P53990 364 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 VCPP55072 806 aaKnown RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 RAB14P61106 215 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATP6V0D1P61421 351 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 GSTO1P78417 241 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PPP2R2BQ00005 443 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ECT2LQ008S8 904 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ROR1Q01973 937 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 KDSRQ06136 332 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 STX3Q13277 289 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC14A1Q13336 389 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC39A6Q13433 755 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 DHX34Q14147 1143 aaKnown RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 DAZAP2Q15038 168 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PUM3Q15397 648 aaKnown RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCDC58Q4VC31 144 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC10A5Q5PT55 438 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 WASHC2DQ5SRD0 308 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 C6orf10Q5SRN2 563 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF626Q68DY1 528 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 OR7E24Q6IFN5 339 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 RWDD4Q6NW29 188 aaKnown RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 TATDN1Q6P1N9 297 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 FAM171BQ6P995 826 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 TMEM88Q6PEY1 159 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 RFPL4BQ6ZWI9 263 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 FRA10AC1Q70Z53 315 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 RTL10Q7L3V2 364 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 COPS6Q7L5N1 327 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ADAMTSL2Q86TH1 951 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 SFR1Q86XK3 245 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 CPXCR1Q8N123 301 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 FAM47BQ8NA70 645 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 EXD1Q8NHP7 514 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 TEX47Q8TBZ9 253 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 NELFBQ8WX92 580 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PIGKQ92643 395 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 DGCR14Q96DF8 476 aaKnown RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 EGLN2Q96KS0 407 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATP6V1G3Q96LB4 118 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PANX2Q96RD6 677 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PSD2Q9BQI7 771 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PAAF1Q9BRP4 392 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 TTLL2Q9BWV7 592 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 WDR12Q9GZL7 423 aaKnown RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 LMAN2LQ9H0V9 348 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 TAF1DQ9H5J8 278 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 CDCP1Q9H5V8 836 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 DENND2DQ9H6A0 471 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ELAC1Q9H777 363 aaKnown RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 SP140LQ9H930 580 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 SAP30LQ9HAJ7 183 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 FANCEQ9HB96 536 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 IL1RAPL2Q9NP60 686 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 FAM114A2Q9NRY5 505 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ETNK2Q9NVF9 386 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PAG1Q9NWQ8 432 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PAQR5Q9NXK6 330 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 SEMA5BQ9P283 1151 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF70Q9UC06 446 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 MALT1Q9UDY8 824 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 NUP50Q9UKX7 468 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 CLEC4AQ9UMR7 237 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 BTBD3Q9Y2F9 522 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PPP2R2CQ9Y2T4 447 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 COL18A1P39060 1754 aa4.65□□□□□ -1.66
HMGB3P13-201ENST00000511263 COL16A1Q07092 1604 aaPredicted RBP4.65□□□□□ -1.66
HMGB3P13-201ENST00000511263 PI4KAP2A4QPH2 592 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 VWA3AA6NCI4 1184 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZSCAN5BA6NJL1 495 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 O00370 1275 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 RTCAO00442 366 aaKnown RBP4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 VWA5AO00534 786 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 RAD51BO15315 384 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 TRAPPC3O43617 180 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 TOM1L1O75674 476 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 CRTAPO75718 401 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLITRK3O94933 977 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 LARGE1O95461 756 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 POP4O95707 220 aaKnown RBP4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 FGBP02675 491 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 ANXA6P08133 673 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMEM191BP0C7N4 346 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 PRKAR1AP10644 381 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 GFAPP14136 432 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 GNAZP19086 355 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 TFEBP19484 476 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 ATP5F1P24539 256 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 PSMA2P25787 234 aa4.65□□□□□ -1.67
HMGB3P13-201ENST00000511263 TNFRSF8P28908 595 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms