RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 OR1I1O60431 355 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 MT-CO3P00414 261 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 RPLP0P05388 317 aaKnown RBP11.45□□□□□ -0.58
UBA3-211ENST00000493957 F3P13726 295 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 GLB1P16278 677 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 CLCNKAP51800 687 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 PDX1P52945 283 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 OR1D5P58170 312 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 PRAMEP78395 509 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 TARDBPQ13148 414 aaKnown RBP eCLIP11.45□□□□□ -0.58
UBA3-211ENST00000493957 GPR33Q49SQ1 333 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 BCL7AQ4VC05 210 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 MSS51Q4VC12 460 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 IYDQ6PHW0 289 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 AFTPHQ6ULP2 937 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 CCNI2Q6ZMN8 369 aaPredicted RBP11.45□□□□□ -0.58
UBA3-211ENST00000493957 TMPRSS9Q7Z410 1059 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 ZNF438Q7Z4V0 828 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 SPRED1Q7Z699 444 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 SFRP1Q8N474 314 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 OR6P1Q8NGX9 317 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 DCUN1D1Q96GG9 259 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 FCRL3Q96P31 734 aaPredicted RBP11.45□□□□□ -0.58
UBA3-211ENST00000493957 KIFC1Q9BW19 673 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 TRIM31Q9BZY9 425 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 EVA1BQ9NVM1 165 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 SOX13Q9UN79 622 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 PSMD13Q9UNM6 376 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 NEUROG3Q9Y4Z2 214 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 PCDHB1Q9Y5F3 818 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 PMS2P1A4D2B8 440 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 FAM221BA6H8Z2 402 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 OR52A4PA6NMU1 304 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 PDZK1P1A8MUH7 402 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 C1QTNF9BB2RNN3 333 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 NTN3O00634 580 aaPredicted RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 TP73O15350 636 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 RAD51CO43502 376 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 C1QTNF9P0C862 333 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 ATP1B2P14415 290 aaPredicted RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 SLC19A1P41440 591 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 RPL21P46778 160 aaKnown RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 PRLHRP49683 370 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 UBE2IP63279 158 aaKnown RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 E2F1Q01094 437 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 FOXK2Q01167 660 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 CAMK2BQ13554 666 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 CLCA4Q14CN2 919 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 ZNF658BQ4V348 819 aaPredicted RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 CASC4Q6P4E1 433 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 NAPRTQ6XQN6 538 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 NLRP9Q7RTR0 991 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 B3GNT8Q7Z7M8 397 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 AMZ2Q86W34 360 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 TMPRSS12Q86WS5 348 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 CCNJLQ8IV13 435 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 DCBLD1Q8N8Z6 715 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 OR4L1Q8NH43 312 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 LKAAEAR1Q8TD35 194 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 ZNF592Q92610 1267 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 GATA6Q92908 595 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 ZNF669Q96BR6 464 aaPredicted RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 SIGLEC10Q96LC7 697 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 WDR83Q9BRX9 315 aaKnown RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 MRM3Q9HC36 420 aaKnown RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 XAB2Q9HCS7 855 aaKnown RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 CATSPERZQ9NTU4 200 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 ZNF624Q9P2J8 865 aaPredicted RBP11.44□□□□□ -0.58
UBA3-211ENST00000493957 RNF14Q9UBS8 474 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 CLCA2Q9UQC9 943 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 MSRB2Q9Y3D2 182 aa11.44□□□□□ -0.58
UBA3-211ENST00000493957 A0A1W2PNU3 283 aaPredicted RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 RHPN2P1A8MT19 583 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 AGRPO00253 132 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 NUDT21O43809 227 aaKnown RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 CSO75390 466 aaKnown RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 URI1O94763 535 aaPredicted RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 VAPBO95292 243 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 MLNP12872 115 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 JUPP14923 745 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 ITGB6P18564 788 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 ALDH4A1P30038 563 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 CSF2RBP32927 897 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 ITGA8P53708 1063 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 SARNPP82979 210 aaKnown RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 HHEXQ03014 270 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 CFHR1Q03591 330 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 DHX9Q08211 1270 aaKnown RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 DMPKQ09013 629 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 LAMB3Q13751 1172 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 NR1D2Q14995 579 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 AMZ1Q400G9 498 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 ANKRD20A4Q4UJ75 823 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 HP1BP3Q5SSJ5 553 aaPredicted RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 NKAIN2Q5VXU1 208 aa11.43□□□□□ -0.58
UBA3-211ENST00000493957 DUS1LQ6P1R4 473 aaKnown RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 SYDE1Q6ZW31 735 aaPredicted RBP11.43□□□□□ -0.58
UBA3-211ENST00000493957 IGDCC3Q8IVU1 814 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms