RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 A0A1W2PRG0 241 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 KRT87PA6NCN2 255 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 K7EPI3 171 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 M0QX08 132 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 DDX39AO00148 427 aaKnown RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 AP3B1O00203 1094 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 CACNB4O00305 520 aaPredicted RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 AP3D1O14617 1153 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 RIPK2O43353 540 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 BUB3O43684 328 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 NEMFO60524 1076 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 PAGE4O60829 102 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 SMPD2O60906 423 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 RTN2O75298 545 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 KRT36O76013 467 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 BEST1O76090 585 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 IPO7O95373 1038 aaKnown RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 MLYCDO95822 493 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 F7P08709 466 aaPredicted RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 SPARCP09486 303 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 NR2F1P10589 423 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 TOP1P11387 765 aaKnown RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 ZNF182P17025 639 aaPredicted RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 HLA-DPA1P20036 260 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 CHMP24386 653 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 BDKRB2P30411 391 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 ACSL1P33121 698 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 RGS2P41220 211 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 CCR9P51686 369 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 OLR1P78380 273 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 RBP5P82980 135 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 GBE1Q04446 702 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 ACTN3Q08043 901 aaPredicted RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 TMEM115Q12893 351 aaPredicted RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 LRMPQ12912 555 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 BFSP1Q12934 665 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 ZBTB17Q13105 803 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 DCTN2Q13561 401 aaKnown RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 ACVR2BQ13705 512 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 COG2Q14746 738 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 ZNF718Q3SXZ3 478 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 CEP55Q53EZ4 464 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 CAVIN4Q5BKX8 364 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 FAM76BQ5HYJ3 339 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 CXorf66Q5JRM2 361 aaPredicted RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 CCDC183Q5T5S1 534 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 SNX30Q5VWJ9 437 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 SIGIRRQ6IA17 410 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 RGMBQ6NW40 437 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 DCLRE1AQ6PJP8 1040 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 TSSK4Q6SA08 328 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 PLEKHM3Q6ZWE6 761 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 LPCAT2Q7L5N7 544 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 PIWIL3Q7Z3Z3 882 aaKnown RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 SLFN11Q7Z7L1 901 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 PRPF39Q86UA1 669 aaKnown RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 EXOC3L1Q86VI1 746 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 SFR1Q86XK3 245 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 CCDC13Q8IYE1 715 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 LRRC43Q8N309 656 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 DCLK2Q8N568 766 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 POC1AQ8NBT0 407 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 SPATA20Q8TB22 786 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 PTP4A1Q93096 173 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 SMARCE1Q969G3 411 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 INTS12Q96CB8 462 aaKnown RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 CFAP36Q96G28 342 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 PPP1R13BQ96KQ4 1090 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 FAM81BQ96LP2 452 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 CCDC114Q96M63 670 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 TMEM68Q96MH6 324 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 MAP7D2Q96T17 732 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 SLC39A3Q9BRY0 314 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 HGH1Q9BTY7 390 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 TNMDQ9H2S6 317 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 UBTD1Q9HAC8 227 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 SCPEP1Q9HB40 452 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 ABI3Q9P2A4 366 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 ICAM5Q9UMF0 924 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 PSAT1Q9Y617 370 aa3.11□□□□□ -1.91
RBM28-207ENST00000488249 PDS5AQ29RF7 1337 aaKnown RBP3.11□□□□□ -1.91
RBM28-207ENST00000488249 RGSL1A5PLK6 1076 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 UBXN8O00124 270 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 VCYO14598 125 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 MCF2LO15068 1137 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 STX6O43752 255 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 PRPSAP2O60256 369 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 KERAO60938 352 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 SEC22BO75396 215 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 MTRF1O75570 445 aaKnown RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 PALMO75781 387 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 DDNO94850 711 aaPredicted RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 TMEM63AO94886 807 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 ZNF432O94892 652 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 SLU7O95391 586 aaKnown RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 PAHP00439 452 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 QDPRP09417 244 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 FERP16591 822 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 IL7RP16871 459 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms