RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CHST9Q7L1S5 443 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 MON1BQ7L1V2 547 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SZRD1Q7Z422 152 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 LCA5Q86VQ0 697 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SLC35F3Q8IY50 421 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMEM199Q8N511 208 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SRBD1Q8N5C6 995 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 ZBTB2Q8N680 514 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 TRIML1Q8N9V2 468 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SCCPDHQ8NBX0 429 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 C1orf131Q8NDD1 294 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SLC25A28Q96A46 364 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 PGAM5Q96HS1 289 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 VCPIP1Q96JH7 1222 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SLC41A2Q96JW4 573 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 IFT74Q96LB3 600 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 GDAP1L1Q96MZ0 367 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 NEUROD6Q96NK8 337 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 MEIS3Q99687 375 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 FAM110AQ9BQ89 295 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMEM47Q9BQJ4 181 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 MMTAG2Q9BU76 263 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 VCX3BQ9H321 246 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 VCX3AQ9NNX9 186 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 DDX4Q9NQI0 724 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 POT1Q9NUX5 634 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 CNOT8Q9UFF9 292 aaKnown RBP4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 RCOR1Q9UKL0 485 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 CEPT1Q9Y6K0 416 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 MRC1P22897 1456 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 NEO1Q92859 1461 aa4.47□□□□□ -1.69
HMGB1P16-201ENST00000447155 SYNRGQ9UMZ2 1314 aa4.46□□□□□ -1.69
HMGB1P16-201ENST00000447155 ANKARQ7Z5J8 1434 aa4.46□□□□□ -1.69
HMGB1P16-201ENST00000447155 TMEM131LA2VDJ0 1609 aa4.46□□□□□ -1.69
HMGB1P16-201ENST00000447155 RIMBP3CA6NJZ7 1639 aa4.46□□□□□ -1.69
HMGB1P16-201ENST00000447155 RIMBP3BA6NNM3 1639 aa4.46□□□□□ -1.69
HMGB1P16-201ENST00000447155 CHD1O14646 1710 aa4.46□□□□□ -1.69
HMGB1P16-201ENST00000447155 LAMB4A4D0S4 1761 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 KDM3BQ7LBC6 1761 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 TOPAZ1Q8N9V7 1692 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 ERCC6L2Q5T890 1561 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 MED23Q9ULK4 1368 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 hCG_1807616A0A1W2PRN6 198 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 FAM90A8PA6NJQ4 464 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 LRRIQ3A6PVS8 624 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 KDM4EB2RXH2 506 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 ANKRD65E5RJM6 399 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 SOCS2O14508 198 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 PPEF2O14830 753 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 HCRTR2O43614 444 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 KRT86O43790 486 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 NKX2-2O95096 273 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CYP1A2P05177 515 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 GSTA2P09210 222 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 FAM90A13PP0C7W8 464 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 FAM90A24PP0C7X0 464 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 UBTFL1P0CB47 393 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CSH1P0DML2 217 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CSH2P0DML3 217 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 PORP16435 677 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 IL7RP16871 459 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 NR1D1P20393 614 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 ALDH3A1P30838 453 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 THPOP40225 353 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 UBA7P41226 1012 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 GARSP41250 739 aaKnown RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CD151P48509 253 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CDH8P55286 799 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 KRT83P78385 493 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 MRPS21P82921 87 aaKnown RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 EPS8Q12929 822 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 XRCC4Q13426 336 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 GPR18Q14330 331 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 E2F5Q15329 346 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 TWIST1Q15672 202 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CDC37Q16543 378 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC142Q17RM4 750 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 ZNF284Q2VY69 593 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CMPK2Q5EBM0 449 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 PLEKHS1Q5SXH7 462 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 JADE1Q6IE81 842 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 PLEKHA7Q6IQ23 1121 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 GLDNQ6ZMI3 551 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 TMEM139Q8IV31 216 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 FAM114A1Q8IWE2 563 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC65Q8IXS2 484 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 ZNF473Q8WTR7 871 aaKnown RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 JAKMIP2Q96AA8 810 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 THOC1Q96FV9 657 aaKnown RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 CALML4Q96GE6 196 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 APOLD1Q96LR9 279 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 SH3GL2Q99962 352 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 C1QTNF5Q9BXJ0 243 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 IFIH1Q9BYX4 1025 aaKnown RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 TRIM7Q9C029 511 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 FOXP1Q9H334 677 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 PDZD7Q9H5P4 517 aa4.46□□□□□ -1.7
HMGB1P16-201ENST00000447155 HAUS4Q9H6D7 363 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms