RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 RBM4Q9BWF3 364 aaKnown RBP17.47■□□□□ 0.39
SNED1-204ENST00000401884 REXO4Q9GZR2 422 aaKnown RBP17.47■□□□□ 0.39
SNED1-204ENST00000401884 TIMMDC1Q9NPL8 285 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 ASF1AQ9Y294 204 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 FFAR2O15552 330 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 FAM189A1O60320 539 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 ELFN1P0C7U0 828 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 PPIBP23284 216 aaKnown RBP17.47■□□□□ 0.39
SNED1-204ENST00000401884 SLC6A2P23975 617 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 PPM1AP35813 382 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 INAQ16352 499 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 TRIM40Q6P9F5 258 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 RD3Q7Z3Z2 195 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 RASSF1Q9NS23 344 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 MRPS23Q9Y3D9 190 aaKnown RBP17.47■□□□□ 0.39
SNED1-204ENST00000401884 FAM234BA2RU67 622 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 CARNS1A5YM72 827 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 SNNO75324 88 aaPredicted RBP17.47■□□□□ 0.39
SNED1-204ENST00000401884 SLC26A3P40879 764 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 NADK2Q4G0N4 442 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 MAMDC4Q6UXC1 1216 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 SERPINA13PQ6UXR4 307 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 TCAIMQ8N3R3 496 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 LIX1Q8N485 282 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 FAM81AQ8TBF8 368 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 NACC2Q96BF6 587 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 C8orf48Q96LL4 319 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 PAAF1Q9BRP4 392 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 GIMAP2Q9UG22 337 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 CNOT6Q9ULM6 557 aaKnown RBP17.47■□□□□ 0.39
SNED1-204ENST00000401884 VPS4AQ9UN37 437 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 CORO2BQ9UQ03 480 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 CNTRLQ7Z7A1 2325 aa17.47■□□□□ 0.39
SNED1-204ENST00000401884 DBTP11182 482 aaKnown RBP17.46■□□□□ 0.39
SNED1-204ENST00000401884 SCAPQ12770 1279 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 CHIT1Q13231 466 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 DEFB115Q30KQ5 88 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 EIF3MQ7L2H7 374 aaKnown RBP17.46■□□□□ 0.39
SNED1-204ENST00000401884 PLD4Q96BZ4 506 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 TIFAQ96CG3 184 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 FAM83DQ9H4H8 585 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 C1orf109Q9NX04 203 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 GON4LQ3T8J9 2241 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 MYH9P35579 1960 aaKnown RBP17.46■□□□□ 0.39
SNED1-204ENST00000401884 KRT75O95678 551 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 CXCL14O95715 111 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 ITGA2P17301 1181 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 RPL3P39023 403 aaKnown RBP17.46■□□□□ 0.39
SNED1-204ENST00000401884 MERTKQ12866 999 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNED1-204ENST00000401884 CENPIQ92674 756 aaPredicted RBP17.46■□□□□ 0.39
SNED1-204ENST00000401884 ZNF510Q9Y2H8 683 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 OR2AG2A6NM03 316 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 ALDH1A2O94788 518 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 SCELO95171 688 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 PAPSS2O95340 614 aaPredicted RBP17.46■□□□□ 0.39
SNED1-204ENST00000401884 PFKMP08237 780 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 HOXB6P17509 224 aaKnown RBP17.46■□□□□ 0.39
SNED1-204ENST00000401884 CAPGP40121 348 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 HMGCS1Q01581 520 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 NAPRTQ6XQN6 538 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 SGK2Q9HBY8 427 aa17.46■□□□□ 0.39
SNED1-204ENST00000401884 ILVBLA1L0T0 632 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 SDHDO14521 159 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 PTGESO14684 152 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 CA12O43570 354 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 NADKO95544 446 aaPredicted RBP17.46■□□□□ 0.38
SNED1-204ENST00000401884 CCDC159P0C7I6 412 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 MYL12AP19105 171 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 IGFBP5P24593 272 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 UPP1Q16831 310 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 ANXA8L1Q5VT79 327 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 DHRS4Q9BTZ2 278 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 CCNB1IP1Q9NPC3 277 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 GALNT8Q9NY28 637 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 RAB23Q9ULC3 237 aa17.46■□□□□ 0.38
SNED1-204ENST00000401884 ANKRD66B4E2M5 251 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 MYL12BO14950 172 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 IMPDH2P12268 514 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 GSK3BP49841 420 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 STC1P52823 247 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 CYP4F2P78329 520 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 CYP4F3Q08477 520 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 RAVER1Q8IY67 606 aaKnown RBP17.45■□□□□ 0.38
SNED1-204ENST00000401884 DEPDC4Q8N2C3 294 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 CIDEBQ9UHD4 219 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 EFCAB10A6NFE3 127 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 ENPP3O14638 875 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 NR4A1P22736 598 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 CXCR2P25025 360 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 NSG1P42857 185 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 SERINC3Q13530 473 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 R3HCC1LQ7Z5L2 792 aaKnown RBP17.45■□□□□ 0.38
SNED1-204ENST00000401884 HID1Q8IV36 788 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 GLB1L3Q8NCI6 653 aaPredicted RBP17.45■□□□□ 0.38
SNED1-204ENST00000401884 PHF21AQ96BD5 680 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 ANGPT4Q9Y264 503 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 ARPC2O15144 300 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 GGT5P36269 586 aa17.45■□□□□ 0.38
SNED1-204ENST00000401884 PSMD7P51665 324 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms