RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CCT3P49368 545 aaKnown RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 POLR2JP52435 117 aaKnown RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 FCGRTP55899 365 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 NKX3-2P78367 333 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 MRPL28Q13084 256 aaKnown RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 NAB1Q13506 487 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GRB14Q14449 540 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 INSCQ1MX18 579 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ATAD3BQ5T9A4 648 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 CCDC149Q6ZUS6 474 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 UXS1Q8NBZ7 420 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 POF1BQ8WVV4 589 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 UBE2FQ969M7 185 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 SEMA3CQ99985 751 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 SH3BP4Q9P0V3 963 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 DUSP12Q9UNI6 340 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ATP8B3O60423 1300 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 DNAJC25-GNG10A0A024R161 153 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 MYBPHLA2RUH7 354 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GSAPA4D1B5 854 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 H3BN98 237 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 MAFGO15525 162 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 TMCC2O75069 709 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 LYPLA2O95372 231 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ANXA6P08133 673 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ATF4P18848 351 aaPredicted RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 GLDCP23378 1020 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GEMP55040 296 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GHRHRQ02643 423 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 IL18R1Q13478 541 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 CCL14Q16627 93 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 PAGE3Q5JUK9 113 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 MORN1Q5T089 497 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ZNF57Q68EA5 555 aaPredicted RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 DENND5AQ6IQ26 1287 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 SYCE2Q6PIF2 218 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 SLC26A9Q7LBE3 791 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 APBB2Q92870 758 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 FAR2Q96K12 515 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 Q96MT0 163 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GPR21Q99679 349 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 SEPT5Q99719 369 aaPredicted RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 BARD1Q99728 777 aaKnown RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 TMEM246Q9BRR3 403 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 EBPLQ9BY08 206 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 DCSTAMPQ9H295 470 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 SAGE1Q9NXZ1 904 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 C3orf18Q9UK00 162 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GIT1Q9Y2X7 761 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 MCM3APO60318 1980 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 M0QZ92 97 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 HBP1O60381 514 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GJB3O75712 270 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 TTKP33981 857 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ARSFP54793 590 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 YBX1P67809 324 aaKnown RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 PRKCZQ05513 592 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 RAD51Q06609 339 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 TCEA2Q15560 299 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ZSWIM7Q19AV6 140 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 C18orf21Q32NC0 220 aaPredicted RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 ZC3H12BQ5HYM0 836 aaKnown RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 MRNIPQ6NTE8 343 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 Q6ZNX1 250 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 Q6ZPB1 254 aaPredicted RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 TRPV3Q8NET8 790 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ASZ1Q8WWH4 475 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ATL1Q8WXF7 558 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 CYP3A43Q9HB55 503 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 NSMCE4AQ9NXX6 385 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GJD2Q9UKL4 321 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 TESMINQ9Y4I5 508 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 BRCA2P51587 3418 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 CASP8AP2Q9UKL3 1982 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 TPST2O60704 377 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 FKTNO75072 461 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 MAFO75444 373 aaPredicted RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 SERPINA1P01009 418 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 CTPS1P17812 591 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 NOS2P35228 1153 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 SLC16A1P53985 500 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 TCEAL1Q15170 157 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ZNF792Q3KQV3 632 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 C10orf120Q5SQS8 335 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 PPP2R2DQ66LE6 453 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 C4orf22Q6V702 233 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GPR156Q8NFN8 814 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ENKURQ8TC29 256 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 STON2Q8WXE9 905 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 STARD8Q92502 1023 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 GTPBP3Q969Y2 492 aaKnown RBP8.72□□□□□ -1.01
RTN4-206ENST00000394611 TP53INP1Q96A56 240 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 ZNF560Q96MR9 790 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 KCNC2Q96PR1 638 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 OR52E6Q96RD3 313 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 TM6SF2Q9BZW4 377 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 BEX1Q9HBH7 125 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 CMTM6Q9NX76 183 aa8.72□□□□□ -1.01
RTN4-206ENST00000394611 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.72□□□□□ -1.019e-9■■■■■ 42.6
RTN4-206ENST00000394611 FLRT1Q9NZU1 646 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms