RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SYCE1Q8N0S2 351 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 IL22RA1Q8N6P7 574 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 TTC13Q8NBP0 860 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 CXorf40BQ96DE9 158 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 FICDQ9BVA6 458 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 SEMA4CQ9C0C4 833 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 AMFRQ9UKV5 643 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 WDR37Q9Y2I8 494 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 TMEM184BQ9Y519 407 aaPredicted RBP17.42■□□□□ 0.38
HDDC3-201ENST00000330334 ARL5AQ9Y689 179 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 BOD1L1Q8NFC6 3051 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 OR52A4PA6NMU1 304 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 MIF4GDA9UHW6 222 aaKnown RBP17.41■□□□□ 0.38
HDDC3-201ENST00000330334 POLR1CO15160 346 aaPredicted RBP17.41■□□□□ 0.38
HDDC3-201ENST00000330334 KCNN4O15554 427 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 RAD1O60671 282 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 CRTAMO95727 393 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 SFTPCP11686 197 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 PSMB4P28070 264 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 CTSCP53634 463 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 DRG2P55039 364 aaKnown RBP17.41■□□□□ 0.38
HDDC3-201ENST00000330334 SEPT7Q16181 437 aaKnown RBP17.41■□□□□ 0.38
HDDC3-201ENST00000330334 METRNLQ641Q3 311 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 TMEM220Q6QAJ8 160 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 TMEM139Q8IV31 216 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 CACNA2D3Q8IZS8 1091 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 ACRBPQ8NEB7 543 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 UBE2Q2Q8WVN8 375 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 ZFPM2Q8WW38 1151 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 ZDHHC12Q96GR4 267 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 SLC12A9Q9BXP2 914 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 TRIT1Q9H3H1 467 aaKnown RBP17.41■□□□□ 0.38
HDDC3-201ENST00000330334 SIDT1Q9NXL6 827 aaKnown RBP17.41■□□□□ 0.38
HDDC3-201ENST00000330334 IMPACTQ9P2X3 320 aa17.41■□□□□ 0.38
HDDC3-201ENST00000330334 MACROD2A1Z1Q3 448 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 B8ZZF3 427 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 BUD23O43709 281 aaKnown RBP17.4■□□□□ 0.38
HDDC3-201ENST00000330334 SRP72O76094 671 aaKnown RBP17.4■□□□□ 0.38
HDDC3-201ENST00000330334 PRAMEF1O95521 474 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 PLA2G2AP14555 144 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 TYRP1P17643 537 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 MSH3P20585 1137 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 CA5AP35218 305 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 CAPZBP47756 277 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 KIF5AQ12840 1032 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 MAP7Q14244 749 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 GPR18Q14330 331 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 DENND5AQ6IQ26 1287 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 PEX26Q7Z412 305 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 PRSS42Q7Z5A4 293 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 KIAA1328Q86T90 577 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 GAS2L3Q86XJ1 694 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 NLGN4XQ8N0W4 816 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 UBL4BQ8N7F7 174 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 BEND7Q8N7W2 519 aaPredicted RBP17.4■□□□□ 0.38
HDDC3-201ENST00000330334 EXD3Q8N9H8 876 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 NLGN4YQ8NFZ3 816 aaPredicted RBP17.4■□□□□ 0.38
HDDC3-201ENST00000330334 OR4K2Q8NGD2 314 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 CCDC110Q8TBZ0 833 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 JPH3Q8WXH2 748 aaPredicted RBP17.4■□□□□ 0.38
HDDC3-201ENST00000330334 LRRC45Q96CN5 670 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 LINC00615Q96LM1 132 aaPredicted RBP17.4■□□□□ 0.38
HDDC3-201ENST00000330334 EFHD1Q9BUP0 239 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 ZNF768Q9H5H4 540 aaKnown RBP17.4■□□□□ 0.38
HDDC3-201ENST00000330334 SEMA5BQ9P283 1151 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 ACSL5Q9ULC5 683 aa17.4■□□□□ 0.38
HDDC3-201ENST00000330334 GOLGA6L9A6NEM1 432 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 MGAT4DA6NG13 374 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 GPR39O43194 453 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 HADHAP40939 763 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 GFERP55789 205 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 XIAPP98170 497 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 IL11RAQ14626 422 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 PTPRCAPQ14761 206 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 RPE65Q16518 533 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 TBR1Q16650 682 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 PARP6Q2NL67 630 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 BCL7AQ4VC05 210 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 AADACL2Q6P093 401 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 KLHL35Q6PF15 583 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 OR2L2Q8NH16 312 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 HEXDCQ8WVB3 486 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 KLHL6Q8WZ60 621 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 EXTL1Q92935 676 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 SLC45A3Q96JT2 553 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 CTRCQ99895 268 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 ASB8Q9H765 288 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 KLHL3Q9UH77 587 aa17.39■□□□□ 0.37
HDDC3-201ENST00000330334 TLN1Q9Y490 2541 aaKnown RBP17.39■□□□□ 0.37
HDDC3-201ENST00000330334 SPTA1P02549 2419 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 OR2AG2A6NM03 316 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 LIFP15018 202 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 CDC25BP30305 580 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 ABHD18Q0P651 414 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 KLF1Q13351 362 aaPredicted RBP17.38■□□□□ 0.37
HDDC3-201ENST00000330334 KCTD11Q693B1 232 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 FAM83HQ6ZRV2 1179 aaPredicted RBP17.38■□□□□ 0.37
HDDC3-201ENST00000330334 ULK4Q96C45 1275 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 TGM7Q96PF1 710 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 TBL1YQ9BQ87 522 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms