RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 CNBD2Q96M20 576 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 ATOH8Q96SQ7 321 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 P2RY12Q9H244 342 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 SLCO3A1Q9UIG8 710 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 TRMT6Q9UJA5 497 aaKnown RBP18.04■□□□□ 0.48
SHISA3-201ENST00000319234 APPL1Q9UKG1 709 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 WNT6Q9Y6F9 365 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 NIPSNAP2O75323 286 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 TFAP2AP05549 437 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 BMP1P13497 986 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 ATXN3P54252 364 aaPredicted RBP18.04■□□□□ 0.48
SHISA3-201ENST00000319234 NAA20P61599 178 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 MYBPC1Q00872 1141 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 FAM151BQ6UXP7 276 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 RPS27LQ71UM5 84 aaKnown RBP18.04■□□□□ 0.48
SHISA3-201ENST00000319234 KIAA0907Q7Z7F0 614 aaPredicted RBP18.04■□□□□ 0.48
SHISA3-201ENST00000319234 RBM23Q86U06 439 aaKnown RBP18.04■□□□□ 0.48
SHISA3-201ENST00000319234 CBARPQ8N350 705 aaPredicted RBP18.04■□□□□ 0.48
SHISA3-201ENST00000319234 GRIN3AQ8TCU5 1115 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 KCNJ9Q92806 393 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 GALPQ9UBC7 116 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 PPIL1Q9Y3C6 166 aa18.04■□□□□ 0.48
SHISA3-201ENST00000319234 GAPDHSO14556 408 aaPredicted RBP18.03■□□□□ 0.48
SHISA3-201ENST00000319234 BNIP3LO60238 219 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 KERAO60938 352 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 CHRM1P11229 460 aaPredicted RBP18.03■□□□□ 0.48
SHISA3-201ENST00000319234 GPX3P22352 226 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 CDKL1Q00532 357 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 APOFQ13790 326 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 CBX2Q14781 532 aaPredicted RBP18.03■□□□□ 0.48
SHISA3-201ENST00000319234 SPATS1Q496A3 300 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 CLEC6AQ6EIG7 209 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 SNX20Q7Z614 316 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 GALNT4Q8N4A0 578 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 ZNF641Q96N77 438 aaPredicted RBP18.03■□□□□ 0.48
SHISA3-201ENST00000319234 HOPXQ9BPY8 73 aaPredicted RBP18.03■□□□□ 0.48
SHISA3-201ENST00000319234 OSBPL11Q9BXB4 747 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 PCDHAC1Q9H158 963 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 NDUFAF1Q9Y375 327 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 PCDHB1Q9Y5F3 818 aa18.03■□□□□ 0.48
SHISA3-201ENST00000319234 UBXN8O00124 270 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 PRMT5O14744 637 aaPredicted RBP18.02■□□□□ 0.48
SHISA3-201ENST00000319234 PGM3O95394 542 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 PRAMEF1O95521 474 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 MTHFD2P13995 350 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 BPIP17213 487 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 PSMC3P17980 439 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 CHRM3P20309 590 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 PTPN5P54829 565 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 ERVK-21P61565 698 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 TXNL4AP83876 142 aaKnown RBP18.02■□□□□ 0.48
SHISA3-201ENST00000319234 MAP7Q14244 749 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 MAP7D1Q3KQU3 841 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 C6orf10Q5SRN2 563 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 C6orf52Q5T4I8 152 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 GRAMD4Q6IC98 578 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 FAM109BQ6ICB4 259 aaPredicted RBP18.02■□□□□ 0.48
SHISA3-201ENST00000319234 UGT3A1Q6NUS8 523 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 DPY19L3Q6ZPD9 716 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 TPRG1Q6ZUI0 275 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 PLPP6Q8IY26 295 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 CELF5Q8N6W0 485 aaKnown RBP18.02■□□□□ 0.48
SHISA3-201ENST00000319234 PTGR2Q8N8N7 351 aaPredicted RBP18.02■□□□□ 0.48
SHISA3-201ENST00000319234 SIDT2Q8NBJ9 832 aaKnown RBP18.02■□□□□ 0.48
SHISA3-201ENST00000319234 ITFG1Q8TB96 612 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 EXT2Q93063 718 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 ZUFSPQ96AP4 578 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 SCRN2Q96FV2 425 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 SLC30A3Q99726 388 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 ASB8Q9H765 288 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 IL26Q9NPH9 171 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 PTTG2Q9NZH5 202 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 BPTFQ12830 3046 aa18.02■□□□□ 0.48
SHISA3-201ENST00000319234 A0A1W2PQ67 120 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 GOLGA8CPA6NN73 597 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 AZIN1O14977 448 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 GPR39O43194 453 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 VPS4BO75351 444 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 CDK14O94921 469 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 ZNF7P17097 686 aaPredicted RBP18.02■□□□□ 0.47
SHISA3-201ENST00000319234 ITGALP20701 1170 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 RPS3P23396 243 aaKnown RBP eCLIP18.02■□□□□ 0.47
SHISA3-201ENST00000319234 LYPLAL1Q5VWZ2 237 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 KANK2Q63ZY3 851 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 CRTC1Q6UUV9 634 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 USP45Q70EL2 814 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 SERPINA9Q86WD7 417 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 DHFR2Q86XF0 187 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 CHERPQ8IWX8 916 aaKnown RBP18.02■□□□□ 0.47
SHISA3-201ENST00000319234 ALDH16A1Q8IZ83 802 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 GOLM1Q8NBJ4 401 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 CD200R1Q8TD46 325 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 SMG7Q92540 1137 aaKnown RBP18.02■□□□□ 0.47
SHISA3-201ENST00000319234 TRIM15Q9C019 465 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 ZDHHC6Q9H6R6 413 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 AKTIPQ9H8T0 292 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 RNF112Q9ULX5 631 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 ERVW-1Q9UQF0 538 aa18.02■□□□□ 0.47
SHISA3-201ENST00000319234 TRBV5-4A0A0C4DH59 114 aa18.01■□□□□ 0.47
SHISA3-201ENST00000319234 NPIPB15A6NHN6 443 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms