RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ARSFP54793 590 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 MGAT3Q09327 533 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 GPS2Q13227 327 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PLCB4Q15147 1175 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 ME3Q16798 604 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 UBAP2Q5T6F2 1119 aaKnown RBP3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 OTUD1Q5VV17 481 aaPredicted RBP3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 JAKMIP3Q5VZ66 844 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 NCAPH2Q6IBW4 605 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 IL20RBQ6UXL0 311 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 Q6ZSV7 163 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PRSS45Q7RTY3 260 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 ADGRG6Q86SQ4 1221 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PLA2G4DQ86XP0 818 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 BLIDQ8IZY5 108 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 RBFAQ8N0V3 343 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 NME8Q8N427 588 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 TEX45Q8NA69 505 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 LSM14AQ8ND56 463 aaKnown RBP3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 DBF4BQ8NFT6 615 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 RDM1Q8NG50 284 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 RASSF8Q8NHQ8 419 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 TMEM163Q8TC26 289 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 SEPT8Q92599 483 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 USP13Q92995 863 aaPredicted RBP3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 TOP1MTQ969P6 601 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 GFM1Q96RP9 751 aaKnown RBP3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 RIT2Q99578 217 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 RAD9AQ99638 391 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 SF3B5Q9BWJ5 86 aaKnown RBP3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 SLC26A6Q9BXS9 759 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 LHPPQ9H008 270 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 EPHX3Q9H6B9 360 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 AZI2Q9H6S1 392 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 WDR6Q9NNW5 1121 aaKnown RBP3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PDRG1Q9NUG6 133 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 HIF1ANQ9NWT6 349 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PLK2Q9NYY3 685 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 VPS54Q9P1Q0 977 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 TUBE1Q9UJT0 475 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 PTGDR2Q9Y5Y4 395 aa3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 TDRD15B5MCY1 1934 aaKnown RBP3.75□□□□□ -1.81
CKS1BP3-201ENST00000600888 TRIP11Q15643 1979 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 IGSF9BQ9UPX0 1349 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 MTCL1Q9Y4B5 1905 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 C17orf113A0A1B0GUU1 675 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 OR6C75A6NL08 312 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 INAFM1C9JVW0 142 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 NCAM2O15394 837 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 MAGEB2O15479 319 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 RGS14O43566 566 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 LDB2O43679 373 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 PSMD10O75832 226 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 CCNE2O96020 404 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 PYGLP06737 847 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 CA3P07451 260 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 MYOGP15173 224 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 GCFC2P16383 781 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 XBP1P17861 261 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 GNLYP22749 145 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 HOXD3P31249 432 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 SFNP31947 248 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 PSMC2P35998 433 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 CDKN2AP42771 156 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 CENPAP49450 140 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 HTR6P50406 440 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 NLRP5P59047 1200 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 DEFB103AP81534 67 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 MRPS6P82932 125 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 SP4Q02446 784 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 SLC18A2Q05940 514 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 LPIN1Q14693 890 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 NFIL3Q16649 462 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 TCTN1Q2MV58 587 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 DNTTIP2Q5QJE6 756 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 FNBP1LQ5T0N5 605 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 ATG9BQ674R7 924 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 RETSATQ6NUM9 610 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZNF517Q6ZMY9 492 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 CCDC60Q8IWA6 550 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 CPXM2Q8N436 756 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 PRR26Q8N8Z3 221 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZMIZ2Q8NF64 920 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 B4GALNT2Q8NHY0 566 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 RFWD2Q8NHY2 731 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 ATP8B4Q8TF62 1192 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 TMEM170AQ8WVE7 144 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 DNAJB3Q8WWF6 145 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 WASF1Q92558 559 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 TMEM18Q96B42 140 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 LYZL4Q96KX0 146 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 APOLD1Q96LR9 279 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 TGS1Q96RS0 853 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 NAP1L4Q99733 375 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 ZNF577Q9BSK1 485 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 FTHL17Q9BXU8 183 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 IFIH1Q9BYX4 1025 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 UPF3BQ9BZI7 483 aaKnown RBP3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 GPR63Q9BZJ6 419 aa3.74□□□□□ -1.81
CKS1BP3-201ENST00000600888 SLC32A1Q9H598 525 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms