RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 HCAR3P49019 387 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 CHIT1Q13231 466 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 ACAP2Q15057 778 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 ADCY4Q8NFM4 1077 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 CCDC159P0C7I6 412 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 POMZP3Q6PJE2 187 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 C19orf60Q96EN9 201 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 XYLT2Q9H1B5 865 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 PNPLA8Q9NP80 782 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 INTS10Q9NVR2 710 aaKnown RBP17.16■□□□□ 0.34
PTPN21-208ENST00000556564 MATN4O95460 622 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 IDO1P14902 403 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 KLC1Q07866 573 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 ANKLE1Q8NAG6 615 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 THAP11Q96EK4 314 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 REEP1Q9H902 201 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 PLLPQ9Y342 182 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 ANKRD36CQ5JPF3 1778 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 CCNYL3P0C7X3 344 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 VIPR2P41587 438 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 COPG2Q9UBF2 871 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 COL18A1P39060 1754 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 PIK3R1P27986 724 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 OLIG2Q13516 323 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 TWIST2Q8WVJ9 160 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 TMEM79Q9BSE2 394 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 SPATA5L1Q9BVQ7 753 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 LYVE1Q9Y5Y7 322 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 TRAFD1O14545 582 aaPredicted RBP17.15■□□□□ 0.34
PTPN21-208ENST00000556564 PTGESO14684 152 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 SLC22A3O75751 556 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 ITGB1P05556 798 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 NOVP48745 357 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 CYP4F3Q08477 520 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 TRMT5Q32P41 509 aaKnown RBP17.15■□□□□ 0.34
PTPN21-208ENST00000556564 ZSCAN5AQ9BUG6 496 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 ZDHHC3Q9NYG2 299 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 TCRBV7S3A2A0A539 114 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 M0R3G1 203 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 OGNP20774 298 aaKnown RBP17.15■□□□□ 0.34
PTPN21-208ENST00000556564 RPL10P27635 214 aaKnown RBP17.15■□□□□ 0.34
PTPN21-208ENST00000556564 GRIA1P42261 906 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 MLLT3P42568 568 aaPredicted RBP17.15■□□□□ 0.34
PTPN21-208ENST00000556564 NUP107P57740 925 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 CLCQ05315 142 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 SULT1C3Q6IMI6 304 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 TRIM40Q6P9F5 258 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 ZYG11AQ6WRX3 759 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 RASGRP3Q8IV61 690 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 SEMA3GQ9NS98 782 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 SLC7A4O43246 635 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 EPCAMP16422 314 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 NTHL1P78549 312 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 TPRG1Q6ZUI0 275 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 ZNF563Q8TA94 476 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 SMARCD2Q92925 531 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 PEBP4Q96S96 227 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 ADAM7Q9H2U9 754 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 SCN2BO60939 215 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 COL6A2P12110 1019 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 STK19P49842 368 aaPredicted RBP17.15■□□□□ 0.34
PTPN21-208ENST00000556564 LMAN2Q12907 356 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 SLC43A3Q8NBI5 491 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 JSRP1Q96MG2 331 aaPredicted RBP17.15■□□□□ 0.34
PTPN21-208ENST00000556564 NPY6RQ99463 290 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 SLCO1B3Q9NPD5 702 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 AVPR1BP47901 424 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 DEF8Q6ZN54 512 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 UNC5BQ8IZJ1 945 aa17.15■□□□□ 0.34
PTPN21-208ENST00000556564 MYH8P13535 1937 aa17.14■□□□□ 0.34
PTPN21-208ENST00000556564 AXIN1O15169 862 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 FKBP6O75344 327 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 ANAPC2Q9UJX6 822 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 AP3M1Q9Y2T2 418 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 SNUPNO95149 360 aaKnown RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 TCEA1P23193 301 aaKnown RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 NCF4Q15080 339 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 INAVAQ3KP66 663 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 ZNF544Q6NX49 715 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 DCAF4L2Q8NA75 395 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 HBEGFQ99075 208 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 ADI1Q9BV57 179 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 WDR55Q9H6Y2 383 aaPredicted RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 MTRRQ9UBK8 725 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 TJP1Q07157 1748 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 SAP18O00422 153 aaKnown RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 NIPSNAP2O75323 286 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 CTSAP10619 480 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 TCF3P15923 654 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 PAICSP22234 425 aaKnown RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 MAPK12P53778 367 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 PON2Q15165 354 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 LRRTM4Q86VH4 590 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 CMASQ8NFW8 434 aaPredicted RBP17.14■□□□□ 0.33
PTPN21-208ENST00000556564 RAD51AP1Q96B01 352 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 PRRG4Q9BZD6 226 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 C2orf71A6NGG8 1288 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 CLDN4O14493 209 aa17.14■□□□□ 0.33
PTPN21-208ENST00000556564 PEX1O43933 1283 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms