RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 NIPAL4Q0D2K0 466 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 UBE2V1Q13404 147 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 GKAP1Q5VSY0 366 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 PACS1Q6VY07 963 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 GLDNQ6ZMI3 551 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF497Q6ZNH5 498 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 PXKQ7Z7A4 578 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 TSPAN33Q86UF1 283 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 CEP97Q8IW35 865 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 RNF168Q8IYW5 571 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 PAF1Q8N7H5 531 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 ADAD2Q8NCV1 583 aaKnown RBP3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 NAXEQ8NCW5 288 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF248Q8NDW4 579 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 TDRD7Q8NHU6 1098 aaKnown RBP3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 GSDMBQ8TAX9 411 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 PRMT6Q96LA8 375 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 PPM1MQ96MI6 270 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 EGLN1Q9GZT9 426 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 PELI2Q9HAT8 420 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 SLC38A7Q9NVC3 462 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 UBA2Q9UBT2 640 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 TSPYL4Q9UJ04 414 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 TMEM184BQ9Y519 407 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 SMCHD1A6NHR9 2005 aa3.14□□□□□ -1.91
HMGB1P29-201ENST00000505659 TEX13DA0A0J9YY54 714 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 ANTXRLA6NF34 631 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 LIPT2A6NK58 231 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 HHLA1C9JL84 531 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 J3QR06 171 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 SLC22A2O15244 555 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 OGG1O15527 345 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZBTB43O43298 467 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 CD4P01730 458 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 RARGP13631 454 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 GNB3P16520 340 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 NFKBIAP25963 317 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 HOXC8P31273 242 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 KRT9P35527 623 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 MSH2P43246 934 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 VEGFCP49767 419 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 HSD17B4P51659 736 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 GPR143P51810 404 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 CTSCP53634 463 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 MPP1Q00013 466 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 EIF4A2Q14240 407 aaKnown RBP3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 CCDC6Q16204 474 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 ALFQ53S48 1182 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 GORABQ5T7V8 394 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 NDUFAF5Q5TEU4 345 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 JAKMIP3Q5VZ66 844 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 NCEH1Q6PIU2 408 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 TMTC3Q6ZXV5 915 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 GCSAMQ8N6F7 178 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF485Q8NCK3 441 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 PPP4R1Q8TF05 950 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 SEMA4DQ92854 862 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 ARHGEF2Q92974 986 aaKnown RBP3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 LRR1Q96L50 414 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 MOV10L1Q9BXT6 1211 aaKnown RBP3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 APOBEC3GQ9HC16 384 aaKnown RBP3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 RCC2Q9P258 522 aaKnown RBP3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 CORO1CQ9ULV4 474 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 C2CD2Q9Y426 696 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 FLT1P17948 1338 aa3.13□□□□□ -1.91
HMGB1P29-201ENST00000505659 NOTCH3Q9UM47 2321 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 CCDC189A1A4V9 331 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 OR2M5A3KFT3 312 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 TMEM8BA6NDV4 472 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 B4E171 279 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 PLOD2O00469 737 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 SMAD9O15198 467 aaKnown RBP3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 BUD23O43709 281 aaKnown RBP3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 HSPA1AP0DMV8 641 aaKnown RBP3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 HSPA1BP0DMV9 641 aaKnown RBP3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 GNAZP19086 355 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 TSPAN7P41732 249 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 DRG2P55039 364 aaKnown RBP3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 PMP22Q01453 160 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 PRKAA1Q13131 559 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 MVPQ14764 893 aaKnown RBP3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 DUOXA1Q1HG43 343 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 ASTE1Q2TB18 679 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 ACSM2BQ68CK6 577 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 CFAP77Q6ZQR2 320 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 ZNF534Q76KX8 674 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 PTOV1Q86YD1 416 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 GALNT13Q8IUC8 556 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 PDILTQ8N807 584 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 RDM1Q8NG50 284 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 TRPC4APQ8TEL6 797 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 TMEM190Q8WZ59 177 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 SGCDQ92629 289 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 C7orf26Q96N11 449 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 TMEM39BQ9GZU3 492 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 RAD21L1Q9H4I0 556 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 IRAK4Q9NWZ3 460 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 ADPRHL2Q9NX46 363 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 EHD2Q9NZN4 543 aa3.12□□□□□ -1.91
HMGB1P29-201ENST00000505659 ORC3Q9UBD5 711 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms