RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 GPR19Q15760 415 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 TRNP1Q6NT89 227 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 TECPR1Q7Z6L1 1165 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 RBM12BQ8IXT5 1001 aaKnown RBP10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 SYTL1Q8IYJ3 562 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 AOPEPQ8N6M6 819 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 EMC1Q8N766 993 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 CXorf40BQ96DE9 158 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 COX14Q96I36 57 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 CEP63Q96MT8 703 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 FANCEQ9HB96 536 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 SEMA3GQ9NS98 782 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 POT1Q9NUX5 634 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 RMND1Q9NWS8 449 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 SCHIP1Q9P0W5 487 aaPredicted RBP10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 TMEM59LQ9UK28 342 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 SIK3Q9Y2K2 1263 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 PCDHGC4Q9Y5F7 938 aa10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 PCYT1BQ9Y5K3 369 aaPredicted RBP10.78□□□□□ -0.68
PTP4A1-207ENST00000639568 ARHGAP42A6NI28 874 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 SOCS5O75159 536 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 MTA2O94776 668 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 CLDN14O95500 239 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 FOSL1P15407 271 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 AGXTP21549 392 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 TNFAIP3P21580 790 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 SOX8P57073 446 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 PPP1CAP62136 330 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 RBPJQ06330 500 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 PLCL1Q15111 1095 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 PRKD1Q15139 912 aaPredicted RBP10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 SEPT7Q16181 437 aaKnown RBP10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 CYP2A13Q16696 494 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 C15orf59Q2T9L4 293 aaPredicted RBP10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 RAB6CQ53S08 254 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 C2CD6Q53TS8 623 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 DNTTIP2Q5QJE6 756 aaKnown RBP10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 AGAP7PQ5VUJ5 663 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 FAAH2Q6GMR7 532 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 GJB7Q6PEY0 223 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 FAM198BQ6UWH4 519 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 CERS6Q6ZMG9 384 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 SPOCD1Q6ZMY3 1216 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 RFLNAQ6ZTI6 216 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 ARCQ7LC44 396 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 SLFN11Q7Z7L1 901 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 TSPAN33Q86UF1 283 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 NLRP8Q86W28 1048 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 NDUFAF2Q8N183 169 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 CCDC185Q8N715 623 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 CPLX3Q8WVH0 158 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 SCRN2Q96FV2 425 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 CCDC34Q96HJ3 373 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 AGAP4Q96P64 663 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 AGAP2Q99490 1192 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 MAP3K3Q99759 626 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 DHRS4Q9BTZ2 278 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 RIOK2Q9BVS4 552 aaKnown RBP10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 RAB6CQ9H0N0 254 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 EPS8L2Q9H6S3 715 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 SLC40A1Q9NP59 571 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 P4HTMQ9NXG6 502 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 SEMA5BQ9P283 1151 aa10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 ZNF624Q9P2J8 865 aaPredicted RBP10.77□□□□□ -0.69
PTP4A1-207ENST00000639568 FGF10O15520 208 aaPredicted RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 HTRA2O43464 458 aaPredicted RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 UNC5CO95185 931 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 C8BP07358 591 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 CAPN1P07384 714 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 CYP2A7P20853 494 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 CA7P43166 264 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 PAPOLAP51003 745 aaKnown RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 CLCNKAP51800 687 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 AIMP2Q13155 320 aaKnown RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 RFTN1Q14699 578 aaPredicted RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 SKOR2Q2VWA4 1001 aaPredicted RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 CCDC14Q49A88 953 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 PRAMEF17Q5VTA0 474 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 ATL3Q6DD88 541 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 TRIM72Q6ZMU5 477 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 MEX3BQ6ZN04 569 aaKnown RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 PYROXD2Q8N2H3 581 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 D2HGDHQ8N465 521 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 ZNF501Q96CX3 271 aaPredicted RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 CELF6Q96J87 481 aaKnown RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 FOXC2Q99958 501 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 C17orf62Q9BQA9 187 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 DPH2Q9BQC3 489 aaPredicted RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 ACTR5Q9H9F9 607 aaPredicted RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 SP110Q9HB58 689 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 METTL5Q9NRN9 209 aaKnown RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 SOHLH2Q9NX45 425 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 GPN3Q9UHW5 284 aaPredicted RBP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 HPSEQ9Y251 543 aa10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.76□□□□□ -0.69
PTP4A1-207ENST00000639568 TTC24A2A3L6 582 aaPredicted RBP10.75□□□□□ -0.69
PTP4A1-207ENST00000639568 TLCD2A6NGC4 264 aa10.75□□□□□ -0.69
PTP4A1-207ENST00000639568 ZBTB11O95625 1053 aaPredicted RBP10.75□□□□□ -0.69
PTP4A1-207ENST00000639568 NEFLP07196 543 aa10.75□□□□□ -0.69
PTP4A1-207ENST00000639568 CTPS1P17812 591 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms